Capsella rubella (pink shepherd's-purse): 17877058
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Entry
17877058 CDS
T02984
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 1B isoform X1
KO
K15559
regulator of Ty1 transposition protein 103
Organism
crb
Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
crb03021
]
17877058
Transcription machinery [BR:
crb03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
17877058
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
CTK3
IFT20
RNase_HII
PspA_IM30
Motif
Other DBs
NCBI-GeneID:
17877058
NCBI-ProteinID:
XP_023633545
LinkDB
All DBs
Position
Unknown
AA seq
439 aa
AA seq
DB search
MSSPFSEEILIDKLAKLNSTQQSIETLSQWCIVHRSEAELVVTTWEKQFHSTEISQKVPL
LYLANDILQNSKRQGNEFVQEFWKVLPGALKDLLSLGDDHGKSVVSRLVTIWEERRVFGS
RSKSLKDVMLSEEAPPPLDVNKKRSRGSKSSKRDSKSAKTKLSSGGVTEKIVSAFNLVRT
ENLNEETETNKCKSTVKRIRTMQKDVEDACSTAKDPRRKTLAKELEEEEITLRQSVEKLR
SIEENRTSLVKHLKEALREQESELENLQSQIQVAQVQTEEAQNMQKRLNNEIPVNSNNGT
SGQSAKVTPASIAAMAEMLTSSSNSSMIMHSVLSSFAAEATQTSGLTKSNSADTNAFAPP
NPPPNPQYHMIPNPAASQQFIPYGFGNIPLMPPGQLPPPPGSMPPHMMNNQPNTAQQQSQ
QGPSFQPPSMMYFGPPHHS
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtccattcagtgaagagatactgattgacaagctcgctaagctcaacagcact
cagcaatctatcgaaactctgtcacagtggtgcattgtccatcgtagtgaagctgagttg
gtggttactacatgggagaaacagtttcacagtacagagatatctcagaaagtgcctctc
ctgtaccttgctaacgatatacttcagaacagcaagcgtcagggtaatgagtttgtgcaa
gagttctggaaagttctccctggtgctcttaaagatcttctttccttgggagatgaccat
ggtaaaagcgtggtctcgcgattggttactatatgggaagagagaagagtttttgggtct
cgttcaaagagtcttaaagatgtaatgctctcagaagaagctcctccaccgcttgatgtc
aataaaaaacgatcacggggatccaaatcttcgaaacgggattcaaaatctgccaaaaca
aaattatctagtggaggtgtgacggagaagatagtgtctgcatttaatctggttcgtaca
gagaacttaaacgaagagacagagacaaacaaatgcaagtctacagttaaacgtatcaga
acgatgcagaaagatgttgaggacgcctgctccactgcaaaagacccaaggagaaaaaca
ctggcaaaagaactggaagaagaagaaatcactctgagacaatctgttgagaaacttaga
tctattgaagaaaatagaacatccctagtaaaacatcttaaggaagccctacgcgaacag
gaatctgaactggagaatcttcaatctcagatacaggtagcacaagtgcaaacagaagaa
gcccaaaacatgcagaaacggctcaataatgaaataccggttaacagtaacaacggaaca
tctggccaatcagcaaaagttactcctgcctcaatagctgcaatggcagaaatgctaact
tcgtcatcaaattcatcaatgattatgcattctgttctgtcttcctttgctgctgaagct
acgcagacctctggtttaaccaaatcgaatagtgcagacacaaatgcatttgctcctcca
aatcctcctccaaacccccagtatcacatgatcccaaatccagctgcatcgcagcagttt
ataccatatggatttggtaacattccgctaatgccgcctggtcaattgccgccaccccct
ggatcaatgccgcctcatatgatgaataatcaaccaaacacagctcagcaacaatcgcaa
caaggtccgagttttcagcccccgagtatgatgtattttggacctccacaccattcataa
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