Capsella rubella (pink shepherd's-purse): 17877277
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Entry
17877277 CDS
T02984
Name
(RefSeq) probable 3-ketoacyl-CoA synthase 21
KO
K15397
3-ketoacyl-CoA synthase [EC:
2.3.1.199
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb00062
Fatty acid elongation
crb01100
Metabolic pathways
crb01110
Biosynthesis of secondary metabolites
crb04626
Plant-pathogen interaction
Module
crb_M00415
Fatty acid elongation in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09100 Metabolism
09103 Lipid metabolism
00062 Fatty acid elongation
17877277
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
17877277
Enzymes [BR:
crb01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.199 very-long-chain 3-oxoacyl-CoA synthase
17877277
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Paralog
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Motif
Pfam:
FAE1_CUT1_RppA
ACP_syn_III_C
Chal_sti_synt_C
Chal_sti_synt_N
ACP_syn_III
HMG_CoA_synt_C
HTH_18
Motif
Other DBs
NCBI-GeneID:
17877277
NCBI-ProteinID:
XP_006281561
UniProt:
R0GCR7
LinkDB
All DBs
Position
Unknown
AA seq
465 aa
AA seq
DB search
MNQTRIDRVSPISLTMSELTTFLGSGGSVFEIFVGLLVLYLIYQRIRTRVKVYLLDFTCY
RAPESNRVPMSTLIETIYLDDKLDQDSIDFQTRILERSWLSNQTSIPLSLMEIPLKKSLP
SVQIETMTTIFTSVEDLLKKNKLSPRSIDILITNCSLHSPTPSLSAMVINKFHMRSNIKS
FNLSGMGCAAGILSVGLANDLLKVHRGSLALIISTEALNTHWYIGKDRSMLLTNCLFRMG
AAAVLMSSNDHDRGNAKYELLHVVRTNKAKDDRAYRCIYQDIDSEEKQGVSITKDVISVA
GDMLKMNLTSLGPSVLPYLEQFQYVIQNILSKKLKIYESTSSYTPNFKTAFEHFCIHTGG
RAVIQAMEMNLNLTKEDIEPSKMTLHRFGNTSSSSIWYTLSYLEAKRRMRKGDRVLQIAF
GSGFKCNSAVWRCIRDVEPNIENKWLDFIDSYPVDVPDSTNIRPG
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaaacgaggatagacagagtttcaccaatctccttgaccatgtcagagctgacg
acgttcctaggctcaggtggttctgtctttgagatctttgtcggtttgctagtattgtat
ctcatctaccaaagaattagaacaagagtcaaagtctacttacttgatttcacttgttat
cgcgcacctgaatcaaaccgcgtcccaatgtcaacccttatcgaaaccatttacctcgat
gacaagctcgatcaagacagtattgacttccaaacccggattcttgagagatcctggtta
agcaaccaaaccagcattcctctttccctgatggagataccactcaagaaatctcttccc
tcagtccaaatcgaaaccatgaccactattttcacctctgttgaggatctcctgaagaaa
aacaaactaagccctcgaagcatagacatactgataaccaactgcagtttgcattcgcct
acaccgtctctaagtgcaatggtgatcaacaaattccatatgagaagcaatatcaagagc
tttaacctgtccgggatgggctgtgcagctgggattctgtcagttggtttggctaatgac
ttgctaaaggttcatcgaggctccttggctcttattattagcaccgaagcgctgaataca
cattggtatattggcaaagacagatctatgcttcttaccaactgtctctttcgaatggga
gcagctgcagtattgatgtctagcaatgatcatgacagaggaaatgcaaagtatgagctc
ttgcatgttgttaggacaaataaagcaaaagatgatcgagcttaccgatgtatctatcaa
gacatagactctgaggaaaagcaaggggtatcgataaccaaagatgtaatcagtgttgct
ggagatatgctgaagatgaatctaacttcactgggaccttcggtattaccttacctagag
caattccaatatgtgatacaaaacattcttagtaagaaactaaagatctatgagtcgact
tcttcttatacaccaaacttcaagacagcgtttgagcatttctgcattcatacaggagga
agagctgttattcaagcaatggagatgaacctgaacttaacaaaagaagacatcgagcca
tcaaagatgactcttcataggttcgggaatacttcttcgtcatccatttggtacactctc
tcttacttggaagcaaagcggagaatgagaaaaggcgatagggtcttgcagattgcattt
ggaagtgggttcaagtgtaacagtgcggtgtggagatgcatccgagacgtggagcccaat
atagaaaacaaatggctcgactttatcgactcatatcccgtagacgtacctgactctaca
aatatcagaccaggctag
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