Capsella rubella (pink shepherd's-purse): 17877281
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Entry
17877281 CDS
T02984
Name
(RefSeq) RNA pseudouridine synthase 7
KO
K15454
tRNA pseudouridine32 synthase [EC:
5.4.99.28
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
crb03016
]
17877281
Enzymes [BR:
crb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
17877281
Transfer RNA biogenesis [BR:
crb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
17877281
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-GeneID:
17877281
NCBI-ProteinID:
XP_006280586
UniProt:
R0GA74
LinkDB
All DBs
Position
Unknown
AA seq
398 aa
AA seq
DB search
MKRKQQEDDNDDGVEKKPVSTTVVATSSNTMSTDHLILQSSSKLSHKQDYIFHGGRRHVR
PYYFEFISHVNKRWTGKTIVDLFADEFKGRPREYYVGAVKSGRIKVDGEIVPVSYIVKSS
QKITHFLHRHEPPVMIDDVVILHQEPDVVTVCKPASVPVHPCGQYRKNTVVGILDAEHDL
GTLFPIHRLDRLVSGLLIIARTAAKADFFRQQIEGGLVKKRYIAKVIGVFPEDEMVVDAN
INYNGSEGRSTAEDAISSGDDKKVKGKPACTKFTRIATNGTHSLVSCEPVTGRTHQIRVH
LQYTGHPIANDPLYLNQQIDNLETYIAKRIDAGERKIVSPDDYVYSTEDFSIDPMCTNCP
KLIPQGYEEHDEALWLHCVQYSGTGWEYECPYPSWASL
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgaaagcagcaagaagacgacaacgacgacggcgtagagaagaaacccgtctct
actacagtcgtcgccactagctcaaacaccatgagcaccgaccacctaattttgcagtca
tcttcgaaactatcacataaacaggactacatcttccatggagggagacgccatgtgaga
ccgtactacttcgagttcatttctcatgtgaacaaacgatggacagggaaaacgattgtg
gatttgttcgccgacgagtttaaaggccggcctcgtgaatattatgttggtgcagtcaaa
agtggtagaatcaaagttgatggagagattgtaccagtttcatacattgtgaaatcatcc
caaaagattactcactttctccacaggcatgaaccaccggtgatgattgatgatgttgtg
atccttcatcaagagcctgacgttgttactgtctgcaaaccagcttctgttcctgtgcat
ccatgtggtcaataccgtaagaacacggttgttggaatccttgatgctgagcatgatcta
ggcactctctttcctattcaccgattagaccgtttggtttctggattgctcatcatagca
agaactgctgcaaaagctgatttttttaggcaacagattgagggtggactggtgaagaaa
cgttatattgcaaaggttattggcgtgttcccagaagatgagatggtagtcgacgctaac
ataaattataatggcagtgaaggaagaagcactgcagaggacgccatttcaagtggtgat
gataagaaggtgaaggggaagcctgcatgtaccaagttcactagaatcgctactaatggg
actcatagcctcgtctcgtgtgaacctgttacaggacgaactcatcaaattcgagtgcat
cttcaatatacagggcatcccatagcgaatgacccactttatctcaatcaacaaatagat
aatcttgagacctatatcgcaaaaagaatcgatgcgggtgagagaaagattgtttcccca
gatgactacgtgtattccactgaagatttcagcatcgatccaatgtgcacaaactgccca
aagttgatcccacaaggatatgaggagcatgacgaggctctctggctacattgcgttcaa
tactctggaactggatgggaatacgagtgtccttatccatcttgggcatccctttag
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