KEGG   Capsella rubella (pink shepherd's-purse): 17877378
Entry
17877378          CDS       T02984                                 
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1 homolog
  KO
K22544  deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
crb  Capsella rubella (pink shepherd's-purse)
Pathway
crb03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:crb00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    17877378
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:crb03400]
    17877378
DNA repair and recombination proteins [BR:crb03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     17877378
SSDB
Motif
Pfam: HD HD_assoc_2
Other DBs
NCBI-GeneID: 17877378
NCBI-ProteinID: XP_023634765
LinkDB
Position
Unknown
AA seq 473 aa
MGAYCNEDLGSLPVYSSGAPTNELRFSKHVYDNVHGNIYLDPLCLKFIDTEQFQRLRELK
QLGVTNMVYPGAVHSRFEHSLGVYWLAGENVQRLKTFQGMELGIDNYDLQTVRLAGLLHD
IGHGPFSHMFEREFLPKVISGSQWSHELMSVNMIDHMVDTHNIDVDAQMLKRVKDMILAS
TEFSQLKSNAEKRFLYDIVANGRNGIDVDKFDYIVRDSRACGLGCNFQFQRLTEMMKVID
NEICYPAKEYRNVHKLFATRADLYRTVYTHPKVKAIELMIVDAMVKANSFLEISSMINDP
SEYWKLDDTILKTIEIAPDPELAEAKELILRVRRRQLYQFCNEYAVPKDKIDHFKAVTPQ
DIICSQKHQSLTLKEEDIAVTNVKIDLARGRQNPLECINFYKDYDSTEKFVIPEDRVSHL
LPTTYQDMIVRVYAKKPELVEAVSEAFENFQMRTYGIKAQVHATPEKKKRRMM
NT seq 1422 nt   +upstreamnt  +downstreamnt
atgggagcgtattgcaacgaagacctaggtagtttaccggtttactcctccggcgctccg
acgaacgagctccggttcagcaaacatgtctacgacaacgttcacggaaacatctatctc
gaccctctttgtttaaaattcattgacactgagcagtttcaaaggcttcgtgaacttaag
cagcttggggtgacaaacatggtatatccaggagctgtgcattctagatttgagcactct
ctaggtgtgtattggcttgcaggcgaaaacgttcagaggctaaaaactttccaggggatg
gagcttggtattgacaattatgatcttcagactgtgaggcttgctggacttctccatgat
attggtcacgggcctttcagtcatatgtttgagcgtgaattccttccaaaggtcataagt
ggcagtcagtggtctcatgagttaatgtctgtaaacatgattgaccatatggttgataca
cataacattgatgttgatgcacaaatgctgaaaagagtaaaggatatgatactagctagt
actgagttttcacagctgaaaagcaatgcagagaaacgtttcttgtatgacattgttgct
aatggccggaatgggattgatgtggacaagtttgactacattgtccgtgattctcgagct
tgtggactgggatgcaattttcagttccaaagactaacagagatgatgaaagtcattgat
aatgaaatctgctatcccgccaaggaatatcgtaatgtccacaagttatttgcaactcgt
gctgatctttatcgaactgtctacacacatccgaaagtaaaggcgatcgagcttatgata
gtagatgccatggtcaaagccaacagtttcttggaaatttcttctatgattaatgatcca
tctgaatactggaagttagacgacacaatcctcaaaactatcgaaatagctccagatcca
gagcttgcagaagctaaagagctgatactccgtgttcgcagaaggcagctgtaccaattc
tgtaacgagtatgcggttccaaaggacaaaatcgatcatttcaaggctgtcactccccaa
gatatcatatgttctcagaaacaccaaagcttgacactaaaagaagaagatatcgctgtt
acaaacgtcaagattgatttggctcgtgggagacaaaatcctcttgaatgcatcaacttc
tataaggattatgatagtacggagaagtttgtgatacctgaagacagagtcagtcacttg
ctaccaacaacataccaagacatgatagtgagagtatatgccaaaaagccagaattggta
gaagcagtttctgaagcatttgaaaacttccaaatgagaacgtatggaatcaaagctcaa
gtgcacgcaacacctgagaaaaagaaaaggcgtatgatgtag

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