Capsella rubella (pink shepherd's-purse): 17877419
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Entry
17877419 CDS
T02984
Name
(RefSeq) putative cyclic nucleotide-gated ion channel 9 isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
17877419
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
crb04040
]
17877419
Ion channels [BR:
crb04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
17877419
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
IQ
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
17877419
NCBI-ProteinID:
XP_006286176
UniProt:
R0GQB9
LinkDB
All DBs
Position
Unknown
AA seq
733 aa
AA seq
DB search
MIKKAVKSQVISGQLEKFVRLDSMDSRYSQTSDSGLNRCTLNLQGPTRGSAQGHNASSGS
FKKGFRRGSKGLWSLGRSIGLGVSRAVFPEDLKVSEKKIFDPQDKFLLLCNKLFVTSCIL
AVSVDPLFLYLPFVKDNEKCIGIDRRLAVIATTLRTVTDAFYLFHMALRFRTAFVAPSSR
VFGRGELVIDPAQIAKRYLQQYFIIDFLSVLPLPQIVVWRFLHISKGPSVLATKRALRSI
ILVQYIPRFIRLYPLSSELKRTAGVFAETAWAGAAYYLLLYMLASHIVGAIWYLLALERY
NGCWSRACGISQNNCTRNFLFCGNEDMPGYAAWSTIKDSVLQINCPVNTTDGDNPPFDFG
IYLRALSSGIVSSKSFVSKYFFCLWWGLKNLSTLGQGLETSTYPGEVIFSITLAIAGLLL
FALLIGNMQTYLQSLTIRLEEMRVKRRDSEQWMHHRMLPPELRERVRRYDQYKWLETRGV
DEENLVQNLPKDLRRDIKRHLCLALVRRVPLFENMDERLLDAICERLKPCLYTEKSYLVR
EGDPVNEMLFIIRGRLESVTTDGGRSGFFNRSLLKEGDFCGEELLTWALDPKSGSNLPSS
TRTAKALTEVEAFALIADELKFVASQFRRLHSRQVQHTFRFYSQQWRTWAAIFIQAAWRR
YVKKKKLEQLRKEEEEEEGEGSVTSIRATFLASKFAANALRKVHKNRIEAKATKELVKYQ
KPSEPDFSADDPC
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgataaaaaaagcagtgaaatcacaagttatcagtggccaactcgagaagtttgtaagg
ttggatagtatggattctaggtactcccagacctctgattcaggtctaaacagatgcaca
ctcaatttacaaggaccaacacgtggttctgctcagggccacaatgcatcttctggttcc
tttaagaaaggttttaggagagggtctaaaggtctttggtctctaggaagatcaattggt
ttgggggtttcacgagctgtttttccagaagatctcaaagtgtctgagaagaagatattt
gatcctcaggacaagtttcttttgctctgcaacaagctgtttgttacttcctgcattctc
gctgtgtctgtggatcctctcttcttgtatcttccattcgttaaggataatgagaaatgt
atcggcatagaccggagattagctgtcatagcaacgacgctgcggacagtaaccgatgcg
ttttatctttttcacatggctcttcggtttagaactgcttttgttgccccttcttcccgt
gtttttggccgaggcgaacttgtgattgaccctgcacagatagctaagcggtatttgcag
cagtatttcatcattgattttctctctgtgcttccacttccacagattgtagtttggcga
tttcttcacatttctaaaggtccaagtgtgctggcaacaaagagggctctgcgatctatc
attttagttcaatatattccgaggttcattcggttgtatcctttgagctcagagttaaag
agaacagcaggtgtttttgctgaaactgcttgggctggtgctgcgtattacttgctactc
tacatgctcgcaagtcatattgttggggcaatatggtatttattagccttagaacgctat
aatggatgctggagcagggcttgcggtattagccagaacaactgtaccagaaacttcctg
ttttgtggtaatgaagatatgcctggttatgcagcttggagtaccatcaaagattctgtt
cttcaaataaattgtccagttaatacaactgatggtgataatcctccttttgattttgga
atatacttaagagccctgtcctctggcattgtctcatctaagagctttgtctctaagtac
ttcttctgtttatggtggggacttaagaatctcagcactcttggtcaagggcttgaaacc
agtacataccctggagaggttattttctccataacacttgccattgctggacttcttctc
tttgctcttctcatcggaaacatgcagacttatcttcaatcccttacaatccgacttgaa
gaaatgagagtgaaaagacgtgattcagaacagtggatgcaccatcgaatgcttccaccg
gaattgcgtgaacgggtcagacgatatgaccagtacaaatggttggaaacacgcggagtt
gatgaagaaaatttggttcagaacctcccaaaggacctgagaagagatatcaaacgccat
ctctgtctggctttggttcggagggttcctctgtttgagaatatggatgagaggctactg
gatgcaatctgtgagcggttgaagccatgtctgtacacggagaagtcttatttggttcgg
gaaggagacccagtcaacgagatgctcttcattatccgtggtcggcttgagagtgtgact
accgatggtgggagaagcggcttcttcaaccgcagtttgcttaaagaaggagatttctgt
ggggaagagcttttgacatgggcacttgatcccaaatccggttccaacctaccgtcatct
accagaaccgcaaaggcactaactgaagtagaagctttcgctttgatagctgatgagctc
aaatttgtggctagccagtttaggagactacacagcaggcaagttcagcacacatttaga
ttttactcacaacaatggaggacttgggctgctattttcatacaagccgcatggcgacga
tacgtaaagaagaagaaacttgagcaactcaggaaagaagaagaagaagaagaaggagaa
ggatcggttactagcatcagggctacgttcctggcgtcaaagtttgctgcaaatgcactt
cgtaaagtccacaagaaccgtattgaagcaaaggctactaaagaacttgtgaaatatcag
aagccttcagagcctgatttctccgctgatgatccttgttga
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