Capsella rubella (pink shepherd's-purse): 17877472
Help
Entry
17877472 CDS
T02984
Name
(RefSeq) autophagy-related protein 11
KO
K08330
autophagy-related protein 11
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
17877472
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crb04131
]
17877472
03029 Mitochondrial biogenesis [BR:
crb03029
]
17877472
Membrane trafficking [BR:
crb04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Scaffold protein
17877472
Mitophagy
Scaffold proteins
17877472
Mitochondrial biogenesis [BR:
crb03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
17877472
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG17_like
ATG11
ATG16
Rod_CreS
Ecotin
IKKbetaNEMObind
Motif
Other DBs
NCBI-GeneID:
17877472
NCBI-ProteinID:
XP_006283029
UniProt:
R0F2P0
LinkDB
All DBs
Position
Unknown
AA seq
1147 aa
AA seq
DB search
MSGSFTESFAGDGKLLLCVAENGHSFEFECSETTTVESVMRFVESVSGIGFSDQLLLSLD
MKLEPQKLLSAFGLPANDREVFIFNKAMLQSNSHPPPPEDVDLQEVADALPPASLHEHHP
LDDASDPALKALPLYERQFRYHFHKGRTIYSCTVVKHENCERLTREQKVQQRAVEVATRN
LEQYYKVIYQNFLEFMKRYKHQHRLHSDLLMNFGRDIEKLRSAKIHPYLQTDTRKCLLDF
VKEDNLKKAVENCASSHRQFENKIAQFQQMFVEVKRKVEELFACRASLSMKNLEVTVKDH
VRFIDEEKSIMQSLSKDVNTVKKLVDDCMSSQLSSSLRPHDAVSALGPMYEVHDKNHLPK
MQSCYNSISELLNFCKNKKNEMNNFVHSYMQKITYVTYIIKDAKLQFPVFREAMVRQDDL
FADLKLVRGVGPAYRACLAEVVRRKASMKLYMGMAGQLAEKLAMKRETEVRRREEFLKTH
GSFVPRDVLASMGLFDTPTQCDVNVAPFDTSLLNIEITDVDRYAPEYLVGLHSKVASSRS
SLTMSSDSSISVEPEEIGLDTFDKENFDDILAASELIEIAGTSKMEVENAKLKADLASAI
SRICSLGPQFEYELLDESEVENVLKNAAEKTAEALQAKDEYEKHLLIMLKEKQMHCDSYE
KRIRELEQRLSDEYLQGQRHNNKDASSLNLMDAKVSEYKVEASGDVEGNKTHVSGSEPMD
EVSCVSNPTSKQPCKTREGMDENMVDSSQVLSRPLDSSMLESQQNNEKGGKDNVLLEMGV
FLSNSSTAESPPKSFDDNAATDRGLDAKHSDDIILELRNELMEKSNKLSEIESKLNGAME
EVSNLSRELETNQKLLEESQMNCAHLENCLHEAREEAQTHLCAADSRASQYNALRASAVK
MRGLFERFRSSVCAGNGIADFADSLRTLAQALANSVNENEDDGTAEFRKCIRVLADKVSF
LSKHREELLEKCQNLEATSEQTRKDLEEKKELVKTLYTKHQLGKQANKEKISFGRLEVHE
IAAFVLNQAGHYEAINRNCPNYYLSSESEALFTDHLPNRPTYIVGQIVHIERQLVKLPSA
LSASASTEAGKTRHLSSDLGSRTLASSVISTSSSATTSNPYGLPSGCEYFIVTIAMLPDT
AIHQQAS
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atgagcggaagcttcactgagagtttcgccggcgatggcaagcttcttctctgcgtggct
gagaatggccactcgtttgaatttgaatgcagcgagaccactacagttgaatctgtgatg
cgttttgttgaatctgtttctggtatcggcttctctgatcagcttcttctctcgctggat
atgaaacttgagccacaaaagctgctttctgcttttggacttcctgcaaatgacagggaa
gtctttatttttaacaaggctatgctgcaaagtaactctcatccgccaccacctgaagat
gtagatttacaggaagttgctgacgctttacctccggcttcattacatgaacatcatccc
ttggatgatgcatcagatccagctttgaaggctttacctttatatgaaaggcaatttcgg
taccatttccataaaggccgcaccatctacagttgcactgttgtgaagcatgagaactgc
gaaaggttaacaagagagcaaaaggtacaacaacgggctgttgaagtcgctacgcggaat
ttggaacagtattacaaggtgatctatcagaactttcttgaatttatgaagcgttataag
catcaacaccgcctccactctgatttgcttatgaattttggaagggatattgagaaacta
aggtcagctaagattcacccttatcttcaaactgatacaaggaaatgcttattggacttt
gtcaaggaagataacctcaaaaaggctgtagagaattgtgctagctctcacaggcaattt
gagaataagattgcacagttccagcaaatgtttgtagaagtcaagcgcaaggtggaggag
ttgtttgcttgcagggcttccttatcaatgaagaacttagaagtgactgttaaggatcac
gtacggttcattgatgaggaaaagagcataatgcagtctctcagcaaagatgtcaatacg
gttaagaaacttgtggatgattgcatgtctagccaactttcctcatctctccgtccccac
gatgctgtttcagccctgggtcctatgtacgaagtgcatgacaagaatcatcttcccaaa
atgcaatcttgctataactcgatttcagaattgctgaatttctgcaagaataagaagaat
gagatgaacaactttgtacacagttacatgcaaaagataacgtatgtcacatatatcatc
aaagatgctaagttgcagtttcctgtttttagagaggcaatggtgcgccaggatgactta
tttgcagacttgaagttagtccgtggtgttggccccgcttatagggcctgtctcgcagag
gtggtaagaagaaaagcctctatgaagctttacatgggtatggctgggcaattggcagag
aagcttgctatgaagcgggaaacagaggtcagaagacgtgaggagtttcttaaaacacat
ggttcttttgtacctcgtgatgtattggcttcaatgggtttatttgatactcccactcag
tgtgatgtcaatgtcgctccttttgatactagtttactcaatattgagatcacggatgtt
gatcgatatgctcctgagtatcttgttgggttacattcaaaggttgcatcctcaaggagt
tcactgaccatgtctagtgatagctcgatttctgttgagcctgaagagataggtttagac
acattcgacaaagaaaattttgatgatatcctagcagcctctgaattgatagagatagca
gggaccagcaagatggaagttgagaatgcaaaactaaaagctgaccttgcttctgcaata
tctcggatctgttcattaggcccacaatttgaatatgagttgctggatgaaagtgaagta
gaaaatgtgttgaaaaatgccgcagagaagacagcagaggcattgcaggccaaagatgag
tatgagaaacatcttctaattatgctgaaggaaaaacaaatgcactgtgattcatatgag
aagcgcatccgtgaactagaacaacgtctttccgatgagtatctgcagggacagagacat
aataacaaagatgcatctagcttgaaccttatggatgcaaaagttagtgaatacaaagta
gaagcttcaggtgacgtggaaggaaataaaactcatgtatctggttctgaacccatggat
gaggtctcatgtgtttcaaatcctactagcaagcagccatgtaaaacccgggaaggtatg
gatgagaatatggttgattcctctcaggtgctcagtcgtccgcttgactcatctatgctg
gaaagccagcaaaacaacgagaaaggtggaaaggataatgtgttgttggaaatgggggta
ttcctaagtaatagttcaacagccgagagcccaccaaaatctttcgatgataatgcggca
actgacagaggtttagatgccaaacatagtgatgatattatcttggaacttagaaatgag
ctgatggaaaagtccaataaactgagtgaaatagagtccaagctaaatggtgctatggaa
gaggtatccaatttgagcagagaattggaaacgaatcagaagcttcttgaagaatcccag
atgaactgtgcgcatttggagaactgcttacatgaagcaagagaagaagcccagacccat
ctctgtgctgctgatagtagagcttcgcagtataatgctcttcgtgcatcagccgtaaag
atgcgaggtctttttgaaagattccggagctctgtttgtgctggtaatgggattgctgat
tttgctgactccttgcgaactttggctcaagctttggccaactccgttaatgaaaatgaa
gatgatggtactgctgagttccggaaatgcatccgagtcctggcagacaaagttagcttc
ctctccaaacaccgggaggaattactggaaaagtgccaaaatcttgaagctacaagtgaa
cagacaagaaaggacttggaggaaaagaaagagctggtgaaaacattgtacactaagcac
caacttgggaagcaggcaaataaggaaaagatatcatttggtcgtcttgaagttcatgag
atagcagcatttgtgctaaaccaggcagggcattacgaggcaatcaacaggaactgccca
aattactacttgtcctctgaatccgaggcattgttcacagatcacctcccaaaccggcct
acatacattgttggacagattgtccacatcgagcgccaattagtgaaactgccatcagca
ctttcagcttctgcatcaaccgaggcaggtaagacacgtcatctcagctcagacctgggc
tcgagaactctggcatcaagtgtaatctcaacatcatcttcagcaacaacttcaaaccct
tatggtctcccttcaggatgtgaatacttcatagtgacaatagcaatgcttcctgacact
gctattcatcaacaagcttcctga
DBGET
integrated database retrieval system
