Capsella rubella (pink shepherd's-purse): 17877536
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Entry
17877536 CDS
T02984
Name
(RefSeq) uncharacterized protein LOC17877536
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
17877536
Enzymes [BR:
crb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
17877536
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Paralog
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarbopepD_reg_2
EMC7_beta-sandw
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
17877536
NCBI-ProteinID:
XP_006286257
UniProt:
R0H399
LinkDB
All DBs
Position
Unknown
AA seq
652 aa
AA seq
DB search
MSNQDSVQLDVQENHVVIGNGIVEVTISKPDGFVTGVSYQGVDNLLEIRNEDYNRGYWDL
VWSEEGAPGTTGKSERIKGTSFEVVVENEELVEISFSRKWDSSLKDSIAPINVDKRFIMR
KNVTGFYSYAIFEHLAEWPAFNLPQTRIVYKLRKDKFQYMAIADNRQRKMPLPEDRLGKR
GRPLAFPEAVLLVHPVEEEFKGEVDDKYQYSCENKDLKVHGWISHNLKLGCWQIIPSNEF
RSGGLSKQNLTSHVGPISLAMFLSAHYAGEDMVMKVKAGESWKKVFGPVFTYLNCLPDKT
SDPLSLWEDAKNQMLTEVQSWPYDFPASEDFAVSDKRGCISGRLLVYDKYLSDELLPANG
AFVGLAPPGEVGSWQLESKGYQFWTEADVDGYFTINNVREGEYNLNAYVTGCIGDYQYEQ
SINITAGCSIDVGNIVYEPPRDGPTVWEIGVPDRSAAEFFVPDPNPKYINKLYIGHPDRF
RQYGLWERYTELYPKEDLVFTIGVSDYKKDWFFAHVTRKLEDDTYQKTTWQIKFKLEKVQ
NNNSTYKIRIALATANVAELQVRVNEEFSDKSTPMFTTGVIGHDNAIARHGIRGIYRLYN
VDVPSEKLIEGDNTLFLTQAMTTGSGAFTGLNGLMYDYIRLEAPPLDSNSHL
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaccaagattctgttcagttggatgtccaagaaaaccatgtggtgattggaaat
ggtatagttgaagtgactatatcaaaaccagatggttttgtcactggagtctcttaccaa
ggcgtcgacaatctactagaaattcgaaacgaagattacaatcgagggtattgggacctt
gtttggagcgaagaaggagcacctggaaccacagggaaatctgaacggatcaaaggcaca
agttttgaagtagtagtggaaaatgaggaactggtggagatttccttctcaaggaaatgg
gattcttctctcaaagacagtattgctcccattaatgtcgacaagaggtttataatgcgt
aaaaatgtaactggattctactcatatgcaatatttgagcatctagcggaatggccggct
tttaacttgcctcagacaaggattgtctacaagcttcgtaaagacaagtttcaatatatg
gcgattgctgataacaggcagaggaaaatgccactcccagaagataggttgggtaaaaga
ggaagacccttggcttttcctgaagctgttcttcttgttcatcctgttgaagaagagttt
aaaggagaggttgatgacaagtaccagtattcatgcgaaaacaaagatctgaaagtgcat
ggatggatctcacataacctgaaattgggttgctggcaaatcattcctagtaatgagttc
agatcaggtggcttgtccaaacagaaccttacctcccatgttggtcccatcagtctcgct
atgtttttgagtgctcactatgcgggtgaggacatggtgatgaaggtgaaagcaggggag
tcatggaagaaagtgtttggtcctgtttttacttaccttaattgtttgcctgacaaaacc
tctgatcctctttctctatgggaagacgcgaaaaaccagatgttaactgaagttcaaagc
tggccttacgatttcccggcttcagaagactttgcagtgtccgataagcgcggttgcatt
agtggtagattactagtatacgacaaataccttagtgatgaacttttaccggcaaatggt
gcttttgtaggtttggctccaccaggagaggttggatcctggcagttagaatctaaggga
tatcaattctggacagaagcagatgtagatggttatttcacgataaataatgtccgagaa
ggcgaatataatctcaatgcttacgtgacaggatgtattggagattatcaatacgaacag
tcaattaacattactgcaggctgcagcattgacgttggcaatatcgtttatgaaccgcct
cgggatgggccaacagtgtgggaaataggggtacctgaccgatctgcagctgagttcttt
gttccagacccaaatcccaaatacatcaacaaactatatattggtcatcctgataggttt
aggcaatacgggctatgggaaagatacacagaactatatcctaaggaagatttggtgttc
accattggcgtcagtgactacaaaaaagattggttctttgcacatgttaccaggaaactt
gaagatgacacatatcaaaaaacgacatggcaaatcaaatttaagctagagaaggtacag
aacaacaacagcacatacaagatccggatcgcgttagcaacagcaaatgtagcagagtta
caggtgagggtgaatgaggaattcagtgataagagtactccgatgttcacaacgggtgtt
atcggacacgacaacgccattgcaagacatgggatacgtggaatctataggctttataac
gtggatgtaccaagtgagaagcttatcgaaggagacaacactttgttcttaactcaagcc
atgactaccggtagtggagccttcactggtctcaatggtctcatgtacgactatatccgc
cttgaagcacctccattagattcaaactctcacctataa
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