KEGG   Capsella rubella (pink shepherd's-purse): 17877539
Entry
17877539          CDS       T02984                                 
Name
(RefSeq) probable carotenoid cleavage dioxygenase 4, chloroplastic
  KO
K09840  9-cis-epoxycarotenoid dioxygenase [EC:1.13.11.51]
Organism
crb  Capsella rubella (pink shepherd's-purse)
Pathway
crb00906  Carotenoid biosynthesis
crb01100  Metabolic pathways
crb01110  Biosynthesis of secondary metabolites
Module
crb_M00372  Abscisic acid biosynthesis, beta-carotene => abscisic acid
Brite
KEGG Orthology (KO) [BR:crb00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00906 Carotenoid biosynthesis
    17877539
Enzymes [BR:crb01000]
 1. Oxidoreductases
  1.13  Acting on single donors with incorporation of molecular oxygen (oxygenases)
   1.13.11  With incorporation of two atoms of oxygen
    1.13.11.51  9-cis-epoxycarotenoid dioxygenase
     17877539
SSDB
Motif
Pfam: RPE65
Other DBs
NCBI-GeneID: 17877539
NCBI-ProteinID: XP_006282800
UniProt: R0GX17
LinkDB
Position
Unknown
AA seq 590 aa
MDSVSSSSSSFISTFSLHHSPLRRLSSSPRLLRINSAVVEERITNPNDSNDHRRIKPKTL
HKSLSSPTKPRPQMNLATALFTTVEDVINTFIDPPSRPSVDPKHVLSDNFAPVLDELPPT
DCEIIHGSLPPSLNGAYIRNGPNPQFLPRGPYHLFDGDGMLHAIRIHNGKATLCSRYVKT
YKYNVEKQNGAPVLPNVFSGFNGVTASVARGALSAVRVLTGQFNPVNGIGLANTSLAFFS
NRLFALGESDLPYAVRLTNNGDIETIGRCDFDGKLSMSMTAHPKTDPITGETFAFRYGPV
PPFLTYFRFDSAGKKQRDVPVFSMTSPSFLHDFAITERNAIFAEIQLGMRTNPMDLVLEG
GSPVGADKGKTPRLGVIPKYAGDESEMKWFEIPGFNIIHAINAWDEDDGNAVVLIAPNIM
SIEHTLERMDLVHALVEKVRIDLVTGIVSRHPISARNLDFAVINPALLGRQSKYVYAAIG
DPMPKISGVVKLDVSKGDRDDCTVARRMYGPGCYGGEPFFVAKDPSNPEAEEDDGYVVTY
VHDEVTGESKFLVMDAKSPELEIVAAVRLPRRVPYGFHGLFVKESDLNKL
NT seq 1773 nt   +upstreamnt  +downstreamnt
atggactctgtttcttcttcctcttcctccttcatctccacgttctctcttcatcactct
cctcttcgccgcctatcttcctctcctcgtctcctccgtatcaactccgctgtcgtcgaa
gaacgtatcactaacccaaacgatagtaatgaccaccgtcgtatcaaacctaaaacactc
cacaaatcactctcatcgccgacgaaaccacgaccacaaatgaatctcgcaacagctctc
ttcaccacagtcgaagatgtgatcaacacctttatcgatccaccgtcacgtccttccgtc
gatccaaaacacgttctttccgacaacttcgctcctgtcctcgacgagcttcctcctacg
gactgcgagatcatccacggctcccttccgccgtcactcaacggagcttacatccgtaac
ggtccgaatccacagttcctccctcgtggtccttaccacctcttcgacggcgacggtatg
cttcacgcgatccgaatccataatggtaaagcaacactctgtagcagatacgtcaagact
tataaatacaacgtcgagaaacaaaacggtgctccggttttgcctaacgtgttttccgga
ttcaacggtgtaacggcgtcggtagctcgtggagctttatcggcggttagagttttaacc
ggacagtttaatccggttaacggcattggtttggctaacacgagtctagctttcttcagt
aaccgtctcttcgctttaggtgaatctgatttaccctacgccgtacgattaactaataac
ggagatattgaaacgatcggacggtgcgatttcgatgggaaattatcgatgagtatgaca
gctcatcctaaaaccgatccaataacgggagagacgttcgctttccggtacggtccggtt
ccaccgtttttaacgtatttccggtttgattccgccgggaaaaaacagagagacgttccg
gtattctccatgacgtctccgtcgtttctccacgacttcgcgatcacggaacgtaacgcg
atttttgctgagattcagcttgggatgaggacgaatccgatggatttggttcttgaaggt
ggttctccggtcggtgctgataaagggaaaacaccgaggctcggtgtgattccaaagtac
gccggagatgaatcggagatgaaatggtttgagattcctggatttaatatcattcacgct
atcaatgcttgggatgaagatgacggaaacgcagtcgttttgatcgctccgaatattatg
tcgattgagcatactttggagaggatggatctggttcacgctttggttgagaaggtgagg
atcgatctcgtcaccgggatcgtgtcacgtcatccgatctcagcgaggaatctagatttc
gcggtgattaatccggcgcttctcgggagacagagcaagtacgtttacgcggcgattgga
gacccgatgccgaaaatctccggggttgttaagctagacgtgtctaaaggagatcgggat
gattgtacggtggcgcgtaggatgtacggacctggttgttacggcggcgaaccgtttttc
gtagcaaaggatcctagtaatccggaggccgaggaggatgacggttacgttgtgacgtac
gttcacgatgaggtgactggagaatcgaagtttctggtgatggacgccaagtcaccggag
cttgaaatcgtcgccgccgtgaggttaccgcgaagggttccgtacggattccatgggcta
ttcgtgaaggagagtgaccttaataagctttag

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