Capsella rubella (pink shepherd's-purse): 17877642
Help
Entry
17877642 CDS
T02984
Name
(RefSeq) asparagine--tRNA ligase, chloroplastic/mitochondrial
KO
K01893
asparaginyl-tRNA synthetase [EC:
6.1.1.22
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
17877642
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
crb01007
]
17877642
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
crb03016
]
17877642
Enzymes [BR:
crb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.22 asparagine---tRNA ligase
17877642
Amino acid related enzymes [BR:
crb01007
]
Aminoacyl-tRNA synthetase
Class II (A)
17877642
Transfer RNA biogenesis [BR:
crb03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
17877642
Prokaryotic type
17877642
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
17877642
NCBI-ProteinID:
XP_023633859
LinkDB
All DBs
Position
Unknown
AA seq
567 aa
AA seq
DB search
MAAAFLPATSLRLTPYSTLRFLSFFPISNASHSLLRPLRRRVLPLFEAFPANSRRRYFCT
AVSESLGSGEGKKVDNYEKQFGSKVGEFRKKLKIAEVKGGADEGLSRVGQSLNIMGWVRT
LRSQSSVTFIEINDGSCLSNLQCVLNSDAEGYDQVESGSILTGASVSVQGTIVASQGTKQ
KVELKVEKIILVGKCDSSYPIQKKRVSREFLRTKAHLRPRTNTFGAVARVRNTLAYATHK
FFQESGFVWVASPIITASDCEGAGEQFCVTTLIPSSHENTNTSIDAIPKTKGGLIDWSQD
FFGKPAFLTVSGQLNGETYATALSDVYTFGPTFRAENSNTSRHLAEFWMIEPELAFADLD
DDMACATAYLQYVVKYVLDNCKEDMEFFDTWIEKGIIRRLSDVAEKEFLQLGYTDAIELL
LKANKKFDFPVKWGLDLQSEHERYITEEAFGGRPVIIRDYPKEIKAFYMRENDDGKTVAA
MDMLVPRIGELIGGSQREERLEVLEARLDELNLNKESYWWYLDLRRYGSVPHAGFGLGFE
RLVQFVTGIDNIRDVIPFPRAPASAEF
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgcgtttctgccggcgacctctctccgtttaactccatactctactctccgc
ttcttatccttcttccctatatctaatgcttctcattctctccttcgccctcttcgccgc
cgagttctccctctcttcgaagcttttccggccaattctcgccggcgatacttttgcaca
gctgtttcggaatctctcggttccggagaggggaagaaagttgataattatgagaagcaa
tttggaagtaaagttggagagttcaggaagaagttgaagattgcggaagtgaaaggagga
gcagacgaagggctgagccgcgtcgggcagagtcttaacattatgggttgggtccggaca
cttcgatctcagagcagtgtcacattcattgagataaatgatggttcatgtttatcgaac
ctgcaatgtgtgttgaattcggatgcagaggggtatgatcaggtagaatctggttctatt
ttgactggagcatccgtatctgtacaaggtactattgtggccagccagggaacaaagcaa
aaggtggaacttaaagttgagaaaatcattttggttggaaagtgtgactcttcttatccc
atccagaagaaacgggtcagccgggaattcttgagaaccaaggctcatctacgtccaaga
accaatacttttggggcggtggcgagagttaggaatactttggcatatgctacacacaag
ttctttcaagaaagtggttttgtttgggtggcaagtccaattattacagcgtcagattgt
gaaggagctggagaacagttctgtgtcactacactcattcccagctcccatgagaacacc
aatacttccattgatgcaattccaaaaacaaagggagggttgatcgattggtctcaggac
ttctttgggaaaccagcattcttgaccgtctctgggcaactcaatggagaaacttatgca
accgctctctcagatgtatacacatttggtcctacatttcgagctgagaattccaacacg
tcgaggcatttggccgaattttggatgattgaacccgaacttgcttttgccgacctggat
gatgacatggcctgtgccaccgcctacctccagtacgtagtaaaatacgttcttgataat
tgcaaggaagacatggagtttttcgatacatggattgagaaaggaatcattcgtcgtttg
agcgacgtagctgagaaagagtttctacagcttggttacacagacgccattgaacttctt
ctgaaagcaaacaaaaaatttgattttccggtgaagtgggggctggatctgcagagcgag
catgaaaggtacataacagaagaggcatttgggggtcgcccagtgataataagagactat
ccgaaggagataaaagcattctatatgcgggagaacgatgatgggaagacagtggcagca
atggatatgcttgtgcctcggataggagagctgataggtggaagccagagagaggaaagg
ctcgaggtgttggaagcaaggcttgatgagttgaacctcaacaaagagagctactggtgg
tacctcgacctacgccgctatggatcagttcctcacgcaggattcgggctagggtttgaa
aggctggtccaatttgtcactggaattgacaatatcagagatgttattcctttcccccgc
gcgcctgcctctgccgaattctaa
DBGET
integrated database retrieval system
