Capsella rubella (pink shepherd's-purse): 17877662
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Entry
17877662 CDS
T02984
Name
(RefSeq) serine/threonine-protein kinase VPS15
KO
K08333
phosphoinositide-3-kinase, regulatory subunit 4 [EC:
2.7.11.1
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
17877662
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
crb01001
]
17877662
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crb04131
]
17877662
Enzymes [BR:
crb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
17877662
Protein kinases [BR:
crb01001
]
Serine/threonine kinases: Other
VPS15 family
17877662
Membrane trafficking [BR:
crb04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
17877662
Autophagy
Autophagosome formation proteins
PI3K complex
17877662
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS15-like_hel
Pkinase
WD40
WD40_Prp19
WDR55
WD40_WDHD1_1st
HEAT
WD40_CDC20-Fz
PK_Tyr_Ser-Thr
Beta-prop_TEP1_2nd
NBCH_WD40
EIF3I
Beta-prop_TEP1_C
Beta-prop_EML_2
WDR90_beta-prop_4th
Adaptin_N
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Vac14_Fab1_bd
Beta-prop_CAF1B_HIR1
HEAT_EZ
Tti2
HEAT_Maestro_2
Motif
Other DBs
NCBI-GeneID:
17877662
NCBI-ProteinID:
XP_006282432
UniProt:
R0GSM1
LinkDB
All DBs
Position
Unknown
AA seq
1494 aa
AA seq
DB search
MGNKIARTTQVSATEYYLHDLPSSYNLVLKEVLCRGRFLKSIQCKHDEGLVVVKVYFKRG
DSIDLREYERRLVKIKDVFLSLEHPHVWPFQFWQETDKAAYLVRQYFYSNLHDRLSTRPF
LSLVEKKWLAFQLLLAVKQCHEKDICHGDIKCENVLLTSWNWLYLADFASFKPTYIPYDD
PSDFSFFFDTRGQRLCYLAPERFYEHGGETQVAQDAPLKPSMDIFAVGCVIAELFLEGQP
LFELAQLLAYRRGQHDPSQHLEKIPDPGIRKMILHMIQLEPEARLSAEDYLQNYVGDVFP
NYFSPFLHTLYCCWNPLPSDMRVATCQGIFQEILKKMMENKPGDEIGGDSPVPSNSVNAS
KVQENFANHKLNISKDLSRNTVNSKDEILYSISDAVKKNRHPFLKKITMDDLETLMSLYD
SRSDTYGTPFLPVEGNMKCEGMVLIASMLCSCIRNIKLPHLRREAILLLRSCSLYIDDDD
RLQRVLPYVVALLSDPTAIVRCAAMETLCDILPLVRDFPPSDAKIFPEYIFPMLSMLPED
TEESVRICYASNIAKLALTAYGFLMHSFQLSDAGVLNELNSQQISATPPSESPSHLQKAN
GNAQLAQLRKTIAEVVQELVMGPKQTPNVRRALLQDIGELCFFFGQRQSNDFLLPILPAF
LNDRDEQLRSVFFEKIVYVCFFVGQRSVEEYLLPYIDQALSDQTEAVIVNALECLSTLCK
SSFLRKRAILQMIECVYPLLRYPSQWVRRAVVTFIAASSECLGAVDSYAFIAPVIRPFLS
RLPASIASEEGLLSCLKPQVTREVIYSIIEKARKPEIMARQRKIWYSSSPQSKDWETVDL
FDKDTGELNSIEYGAEQKQNLEEQSQIRSASKQQEVQGKYAEKDAKLRIPRNPRPNVSNT
VELRDPLYPEKLQFSGFMAPYVSGLNSVIEPENIPLYSFSMDKRAATNPPVASESSLQMN
SLGMGSLSVPWMDSMSKSFNLASSVPVPKLISGSFHVGTNPKQFYRVVHEPESRENEQIP
SAISKFQDLGVSSSSKSASITSEDASSPADLVGEPSLSRTTVPDSGWKPRGVLVAHLQEH
RSAVNDIATSSDHSFFVSVSDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRGMCTTMLRN
STQVVVGASDGVIHMFSIDHISRGLGNVVEKYSGIVDIKKKDVKEGALVSLFNYTADSLS
GPMVMYSTQNCGIHLWDTRSDLDAWTLKANPEEGYVSSLVTSPCGNWFVSGSSRGVLTLW
DLRFRVPVNSWQYPIICPIEKMCLCFLPPSVSVSTSMRPNIYVAAGCNEVSLWNADGGNC
HQVLRVANYENETDVSEFQWKLPSTKVSSKPNPRQNMSSKYRIEELNEPPPRLPGIRTLL
PLPGGDLLTGGTDLKIRRWDYSSPERSYCICGPNLKGVGNDDFYELKTNSGVQFVQETKR
RPLATKLTAKAVLAAAATDTAGCHRDSVQSLASVKLNQRLLISSSRDGAIKVWK
NT seq
4485 nt
NT seq
+upstream
nt +downstream
nt
atgggaaacaaaatcgctcggacgacacaagtctcggcgacggagtactacctccacgac
ttgccgtcttcgtacaatctggtcttgaaagaggttctgtgtcgagggagattcctcaag
tcgatccaatgtaagcacgacgaaggattggtggttgttaaggtttacttcaagcgtggt
gactcgatcgatctcagggagtatgagcgccgtctcgttaagatcaaggatgtgtttttg
tctctagagcatcctcacgtctggcctttccagttttggcaagagactgataaagcggct
tatctagtgaggcagtacttttacagtaatctgcatgatcggttgagtactcggcctttc
ctcagccttgtagagaagaaatggttggcgtttcagctgcttcttgctgtgaagcaatgt
catgagaaggatatatgtcatggtgatatcaagtgcgagaacgtattgctcacttcctgg
aactggctttaccttgctgattttgcatccttcaaacccacatacattccttatgatgat
ccatcagacttctccttcttctttgacacaaggggacaaagactttgttatctggctcct
gagagattctatgagcacggaggtgagacacaagtagcacaagatgctccattaaagccg
tccatggatatatttgctgttgggtgtgtgatagcagaactttttcttgagggtcagcca
ttatttgaactggcccagcttctcgcttatcgtagagggcaacatgatcctagccaacac
cttgaaaagattcctgatccaggaattcgcaagatgattcttcatatgattcagttagaa
cctgaagcacgcctatcagctgaagactacctgcaaaattatgtgggagatgttttccca
aactacttttcaccatttctgcacactttatattgttgttggaatccacttccgtcagat
atgagggtagcaacttgccaggggatatttcaagaaatactgaagaagatgatggaaaat
aagccaggtgatgagattggtggtgattctcctgtaccttcaaattcagtgaacgcaagc
aaggtacaggaaaattttgcaaatcacaaattgaacatatcgaaagacttgagcaggaat
actgttaactccaaggatgagatcctttactctatttctgatgcagtcaagaaaaatcgc
catcctttcttaaaaaagataacaatggacgatttggagacactaatgtctctctatgat
agccgttctgacacttatggcacaccttttctaccggtagagggtaacatgaaatgtgag
ggaatggttcttattgcatctatgctctgttcttgtatccgcaatatcaagttgcctcat
ttgaggagggaagctatacttctattgaggtcttgctctttgtatattgatgatgatgat
cgcttacagcgtgtacttccatacgttgttgccttgctttctgatccaacagcaattgtg
cggtgtgctgccatggaaactttgtgtgacattctgccgcttgttcgagattttcctccc
agtgatgcgaagattttcccagagtatatatttcctatgctctccatgcttcctgaagat
acagaagagagtgtgaggatatgctatgccagcaatattgcaaaacttgcccttactgcc
tatggattcctgatgcattctttccagttgagcgacgcaggggttcttaatgaattgaat
tcccagcagatctccgctacacctcctagtgagtcccccagtcatttgcaaaaggcaaat
ggcaatgcgcagcttgcacagcttagaaaaactatagctgaagttgttcaagagcttgtt
atgggtccaaaacaaactccaaatgttagaagagcactccttcaggacataggagaactc
tgctttttctttggtcagaggcagagtaatgactttctactaccgatcctccctgccttt
ctaaatgacagagatgaacagctaagatctgtattctttgaaaagattgtttatgtatgc
ttttttgttggtcagagaagtgtggaggagtatctgttgccctatatcgatcaagctttg
agtgatcagacagaggctgtcattgtcaatgcattggagtgcttatccacattatgcaag
agtagtttcttgcggaagagagctatcctccaaatgatagagtgtgtttatccgttgctg
cgctatccatctcaatgggtaaggagggcagttgtcactttcattgccgcaagtagtgaa
tgcttaggtgcagtcgactcttatgcttttattgccccagtaatacgcccctttctcagt
agactccctgcgtcaattgcttctgaggaaggtctactttcatgtttgaagccccaagtc
acaagggaagtgatttacagtatcatagaaaaagctaggaaaccagaaatcatggcgaga
cagcgaaagatatggtacagttcttcacctcaatccaaagattgggaaactgttgatttg
tttgacaaagatactggagagttgaattcaatagaatacggggccgaacagaagcaaaat
ctggaagaacaatcacagattaggagtgcatcgaagcaacaagaagttcaaggaaaatat
gcagaaaaagatgcaaaattgagaatcccgagaaacccaagacccaatgtttccaacact
gttgagttacgtgatcccttatatccagagaagttacagttctctgggtttatggcacca
tatgtatctggtttgaatagcgttattgaaccagagaacatacctctctattcctttagc
atggacaaacgagcagctacaaatcctcctgtggcttctgagtcttcattgcagatgaac
tctctgggaatgggttcattatcagtgccatggatggattccatgagtaagtcctttaac
ttggctagttcggtcccagtgcctaagctgatttctgggtcattccatgtcggtaccaat
cctaaacaattttacagagtcgtacatgagccagaaagcagagaaaatgaacaaatcccc
tcagctatcagtaaatttcaagatctcggtgtatcaagctcctcaaaaagtgcttctata
acttcagaagatgcttcttctccagcggatcttgttggagaaccatctctgtcaaggaca
acggttccggattcagggtggaagcctcgtggagtattagtagctcatttacaggagcat
cgctctgcggtcaacgacattgccacttcaagcgatcatagcttttttgttagtgtatca
gatgattccacagtgaaggtgtgggactctagaaaactggaaaaggacatctcttttagg
tcaaggctaacatatcatctcgagggaagtagagggatgtgcacaacaatgcttcggaat
tcaacacaagttgtagttggagcctccgatggtgtgatacatatgttttcaattgaccat
atctccagaggcttggggaacgtagtggaaaagtattcaggaattgttgatataaaaaag
aaggatgttaaagaaggcgctctagtttctctctttaattataccgctgatagtctttct
ggtccgatggtaatgtatagtactcaaaactgtggaatccacctttgggatacaagatca
gatttagatgcatggacactgaaagcaaaccctgaagaaggatatgtttcatctttggtt
acaagcccttgcgggaattggtttgtctctgggtcttcaaggggagtgcttactctttgg
gatttgagatttcgtgttcccgtaaattcatggcaataccctatcatatgccccatagag
aagatgtgcctctgctttcttcctccaagcgtctcagtgtccaccagtatgagacctaat
atttatgttgctgccggttgcaacgaagtttcactctggaatgcagatggaggtaactgt
caccaggtattgagagtagcaaactatgaaaacgagacggatgtttctgagtttcaatgg
aagttaccaagcactaaggtaagttccaagccgaatcctcgccagaacatgagttccaag
tacagaatcgaagagttgaatgagcctcctcctcgtcttcctggtatccgcactttgctt
cctttacctggaggcgacttgttaacaggtggtactgatttgaagattcggcgttgggac
tactccagccctgagagaagttattgtatatgcggtccgaatttgaaaggagtaggaaac
gatgatttctatgaacttaaaaccaactccggcgtgcaatttgttcaggagacaaagagg
cggcctctggcaaccaaactgacggcaaaggcggtacttgcagctgctgcgacagacacc
gcgggttgtcaccgtgactcagttcagtctttggcatctgtgaaactgaatcagagactg
ttgatatcaagtagcagagatggagccattaaggtctggaagtaa
DBGET
integrated database retrieval system
