Capsella rubella (pink shepherd's-purse): 17877699
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Entry
17877699 CDS
T02984
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1 isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
17877699
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crb03019
]
17877699
Messenger RNA biogenesis [BR:
crb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
17877699
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
SET1_RBD
Motif
Other DBs
NCBI-GeneID:
17877699
NCBI-ProteinID:
XP_006283675
UniProt:
R0GZK2
LinkDB
All DBs
Position
Unknown
AA seq
455 aa
AA seq
DB search
MNLEEQKMESGSDLGKLFIGGISWDTDEERLREYFGKYGDLVEAVIMRDRTTGRARGFGF
IVFADPSVAERVIMEKHIIDGRTVEAKKAVPRDDQQVLKRHASPMHLISPSHGGNGGSAR
TKKIFVGGLPSSITEAEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDAEESVDMVL
HKTFHELNGKMVEVKRAVPKELSSTPPNRSPLLGYGNNYGVVPNRSSANSYFNSFPPGYN
NNNLGSAGRFSPIGSGRNAFSSFGLGLNQELNLNSNFDGNTLGYSRIPGNQYFTSASPNR
YNSPIGYNRGDSAYNPSNRDLWGNRSDSLGPSWNLGVSAGNNRGNWGLSSVGSDTNGYGR
SYGMGSGLSGLSFSGNTNGFDGSIGELYRGSSVYSDSTWQQSVPHNQSSNELDGLSRSYG
FGIDHIGSDQSANASEGYPGNYNVGNRQTNRGIEA
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgaatctggaggagcaaaagatggaatcgggatcggatctgggaaagctcttcattggc
gggatttcatgggatacagatgaagaacgactgagagagtattttggcaagtatggagat
ttggttgaagctgtgatcatgagagaccgtaccactggacgtgctcgtggctttgggttt
atcgtctttgcagatccttctgttgcagagagagtgatcatggagaaacacatcattgat
ggccgcacggtcgaggcgaagaaagctgtccctcgagatgatcagcaagtgctaaaacgg
catgccagtccaatgcaccttatctcacccagccatggtggtaatggtggcagcgcacga
acaaagaagatctttgttggaggtttaccatctagcattactgaggccgagttcaagaac
tactttgatcagtttggtacaattgctgatgttgtggtaatgtatgatcataatacacag
aggccaagaggctttggcttcatcacctttgatgccgaagagtccgttgatatggttctc
cacaagaccttccatgagttaaacggaaaaatggttgaggtcaaacgagcagtgccaaag
gagctctcctcgactcctcctaaccgaagcccgcttcttgggtatggtaacaactatgga
gtggtccctaacaggtcatctgctaatagctacttcaatagtttccctcctggttacaac
aacaataatctaggctctgctggccggtttagtcctattggtagcggtagaaatgctttc
tctagctttgggctcggtttaaatcaagaactgaatttgaattcaaactttgatggaaac
actcttgggtatagccggatcccaggcaaccaatacttcaccagtgcttcaccaaaccgt
tacaactctccaattgggtacaacagaggtgactctgcttacaacccgagcaacagagac
ttgtggggaaacagaagtgattctcttggtcccagttggaacttgggagtatcagctggt
aacaacagaggaaactggggactttcttctgtggggagcgatacaaatggctatggaaga
agctatgggatgggttctggactttctgggttatcattttcgggtaatacaaatggtttt
gatggctctataggggaattgtatagaggcagctcggtttacagcgactcaacgtggcag
cagtcagtgcctcataatcagtcttctaatgagttagacggcttgtctcgctcttatggc
tttggtattgaccatataggctcagaccaatctgccaatgcctcagaaggttaccccgga
aactacaatgtcggaaatagacaaacaaatagaggtattgaagcatag
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