Capsella rubella (pink shepherd's-purse): 17877744
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Entry
17877744 CDS
T02984
Name
(RefSeq) autophagy-related protein 18b
KO
K17908
autophagy-related protein 18
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
17877744
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crb04131
]
17877744
03029 Mitochondrial biogenesis [BR:
crb03029
]
17877744
Membrane trafficking [BR:
crb04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
17877744
Mitochondrial biogenesis [BR:
crb03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
17877744
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROPPIN
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
BCAS3_WD40
Beta-prop_Vps41
Beta-prop_RSE1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_CDC20-Fz
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_2nd
Motif
Other DBs
NCBI-GeneID:
17877744
NCBI-ProteinID:
XP_006283977
UniProt:
R0GX28
LinkDB
All DBs
Position
Unknown
AA seq
365 aa
AA seq
DB search
MANQSSPSPIYCVSFNQDNSGFAISWKDSFKIFDSATGRLCYERAAGAFVIVEMLYSSDL
LAIVGAGEQASLSPRRLCLFKTTTGSPLRELNFLTSILAVRMNKKRLVVVLLEKTFVYDI
NTLVMLDTIDTVPNPKGLSAFSPCLEACYLAVPASVTKGSVLVYNVMDLQSHSEIDAHRS
PLAAIALSSNGMYIATASEQGTLIRVHLVSEATKSFSFRRGTYPSTIYSLSFGPSTELPD
ILIATSSSGSIHAFSLRLALNQRSKRSTSFLGSVLPDSVSDALDPAHHHVLQNAVSSGIR
SYAVIRKIDKLEGTSSPSQFKSLRATVSVITYNGYFQEYTLSINYKNESLWTLDREFNLF
SITTR
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatcagtcctctccttctcccatctattgtgtttctttcaatcaagataatagt
ggttttgcgataagttggaaagattccttcaaaatattcgattccgctacgggcagactt
tgctatgaacgagctgctggggcttttgttattgttgagatgttgtatagctcagatctg
cttgccattgttggagctggtgaacaggcttctctatccccacggcgtctttgtttgttc
aagaccacaacgggttcacctcttagggaattgaactttttaacttctatactcgctgtc
cgtatgaacaagaaaagacttgttgttgtgctgctagagaaaacattcgtttacgacata
aatactcttgtcatgcttgatactatcgacaccgtgcctaatccaaaaggtctatctgcc
ttctcaccatgtcttgaagcctgctacttagctgttccagctagtgtgacgaaaggatct
gttctggtttataacgtcatggatttgcagtctcacagtgagatagatgcacatcgttct
ccattggctgcgattgcactctcttcgaatggaatgtacattgctacagcatctgagcaa
ggaactctgatccgagtccatcttgtttcggaagcaactaagtcatttagtttcaggaga
ggaacatacccatctactatatattcactgtcttttggaccatctacagagcttccggat
atattaattgcaacgagttcttcaggctcgattcatgccttctctttaaggttggcctta
aaccaaagaagcaaaaggtctaccagctttcttggttcggttcttccggacagcgtgagt
gatgcactagatccagctcatcatcatgtgcttcaaaacgcagtttcttctggaattaga
agttatgcagtgattaggaagatagacaaacttgaaggaacatcatctccatcacagttt
aaatctcttagagcaacggtatcggtgattacctataatgggtattttcaggagtacacg
ctaagtatcaattacaagaatgaatctttgtggacactggaccgtgaattcaatctcttc
tccataaccaccaggtga
DBGET
integrated database retrieval system
