Capsella rubella (pink shepherd's-purse): 17877763
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Entry
17877763 CDS
T02984
Name
(RefSeq) long chain acyl-CoA synthetase 4
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb00061
Fatty acid biosynthesis
crb00071
Fatty acid degradation
crb01100
Metabolic pathways
crb01212
Fatty acid metabolism
crb04146
Peroxisome
Module
crb_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
17877763
00071 Fatty acid degradation
17877763
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
17877763
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
crb01004
]
17877763
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
crb04147
]
17877763
Enzymes [BR:
crb01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
17877763
Lipid biosynthesis proteins [BR:
crb01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
17877763
Exosome [BR:
crb04147
]
Exosomal proteins
Exosomal proteins of breast milk
17877763
Exosomal proteins of breast cancer cells
17877763
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
17877763
NCBI-ProteinID:
XP_023635050
LinkDB
All DBs
Position
Unknown
AA seq
666 aa
AA seq
DB search
MAEPEKYIFKVEEGKEGSDGRPSVGPVYRSIFAKDGFPEPIEGMDSCWDVFRFVVEKYPN
NPMLGRREIVDGKPGKYVWQTYQEVYDIVIKLGNSLRSHGVKDEAKCGIYGANSPEWIIS
MEACNAHGLYCVPLYDTLGAGAVEFIIRHSEVSIVFVEEKKITELFKTCPNSTEYMKTVV
SFGGVSHEQREEAKNFGLDIYAWDEFLKLGDGKQCDLPIKKKSDICTIMYTSGTTGDPKG
VMISNESIVTLIAGVIRLLKSANEALSVKDVYLSYLPLAHIFDRVIEECFIQHGAAIGFW
RGDVKLLIEDLGELKPTIFCAVPRVLDRVYSGLQKKLSDGGFLKKLLFNSAFSYKFGHMK
KGQSHVEASPMCDKLVFSKVKQGLGGNVRIILSGAAPLASHVESFLRVVACCHVLQGYGL
TESCAGSFVSLPDKLDMLGTVGPPVPNVDIRLESVPEMEYDALASTPRGEICIRGKTLFS
GYYKREDLTKEVLIDGWLHTGDVGEWQPNGSMKIIDRKKNIFKLSQGEYVAVENIENIYG
EVQAVDSVWVYGNSFESFLVAVANPNQHILEHWAAENGVSGDYEALCQNAKAKEFILGEL
VKMAKEKKMKGFEIIKAIHLDPVPFDMERDLLTPTYKKKRPQLQKYYQSVIDEMYKTTNE
KFASRG
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggcggagccggagaaatacatattcaaggttgaggaaggcaaagaaggtagcgatggt
agaccttcagttggacctgtttaccgcagtatctttgctaaggacggcttccccgagccg
atcgaaggaatggatagttgttgggatgttttccgttttgtagtggagaagtatccaaac
aatccaatgcttggacgccgcgagattgtggatggaaagccgggtaagtatgtctggcaa
acataccaagaagtttacgacattgtcatcaaactcggaaattctctccgaagtcatgga
gttaaggatgaagcaaaatgtggtatctatggtgccaattctcctgagtggattataagc
atggaggcctgtaatgcacatggactctattgtgttccgttatatgatacactaggtgct
ggtgctgtggaattcattattcgccattcagaggtttcaatcgtctttgtggaagagaaa
aagattactgagttatttaagacatgcccaaactcgacagagtacatgaaaactgttgtg
agcttcggtggtgtctcacatgagcaaagagaagaagctaaaaattttgggttggacata
tatgcttgggatgaatttttgaagctgggtgatggaaagcaatgtgatctccccatcaaa
aagaaaagtgacatttgcacgattatgtatactagtggaaccactggtgacccaaaggga
gtgatgatatctaatgaaagtattgttacactaatcgccggagtgatccgtctactgaaa
agcgctaatgaggccttgtccgtgaaagatgtgtatctttcttatcttccgcttgcccac
atctttgaccgagttatcgaggagtgtttcattcaacacggtgctgcaattggcttctgg
cgtggggatgtcaaattgttgatagaagaccttggtgagcttaaaccaactatcttctgc
gctgtacctcgtgtcctggatagagtatactcaggtcttcagaagaagctttctgatggt
ggattcttgaaaaagttgctgtttaattctgcattttcctataaatttggacatatgaag
aagggacagtctcatgtggaggcctcaccaatgtgtgacaaacttgtgttcagcaaggtt
aaacaaggactcggaggcaatgtgagaattattttatctggagctgctcctcttgctagt
catgtagagtcatttctgagagtggtggcatgctgtcatgttctacaaggatacggtctt
accgaaagctgtgctggaagttttgtctcgctgccagacaagctggacatgctcggcaca
gttggtccaccagtgccaaacgttgatatacgccttgagtctgtccctgagatggaatat
gacgctcttgcaagtactccacgtggtgaaatctgcattcgaggaaaaacccttttctct
ggatactacaaacgtgaagacctcacaaaggaggttctcattgatggatggctgcacaca
ggtgatgtcggtgagtggcaaccaaatggaagcatgaagatcattgacagaaagaagaat
atctttaaactctcacaaggagagtatgtggcggttgagaacatagaaaacatctacggt
gaagtgcaagctgttgattccgtgtgggtgtacggaaacagctttgagtcattcctagtc
gcagtcgccaatccaaaccagcatatccttgaacactgggctgcagaaaacggtgtgagc
ggtgattacgaggctctctgtcaaaatgcaaaggcaaaggaattcatactaggagaactt
gttaaaatggccaaagagaaaaagatgaaggggttcgagatcatcaaggcaattcatcta
gaccctgtgccgtttgacatggaacgcgatcttcttacgccaacctacaaaaagaaaagg
cctcagttacaaaaatactaccagagtgtgatcgatgaaatgtacaagaccacaaatgaa
aaatttgcttccagagggtag
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