Capsella rubella (pink shepherd's-purse): 17877964
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Entry
17877964 CDS
T02984
Name
(RefSeq) serine/arginine-rich splicing factor RS40 isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
17877964
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
crb03041
]
17877964
Spliceosome [BR:
crb03041
]
Common components
Common spliceosomal components
SR proteins
17877964
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
Nup35_RRM_2
RNA_bind
RRM_Nup35
DUF2129
Motif
Other DBs
NCBI-GeneID:
17877964
NCBI-ProteinID:
XP_006285334
UniProt:
R0F8G9
LinkDB
All DBs
Position
Unknown
AA seq
348 aa
AA seq
DB search
MKPVFCGNFEYDAREGDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRIEF
GRKGRRLRVEWTKSERGGDRRSGGGSRRSSSGMRPSKTLFVINFDADNTRTRDLERHFEP
YGKIVNVRIRRNFAFIQYEAQEDATKALDATNNSKLMDKVISVEYAVKDDDARGNGHSPE
RRRDRSPERRRRSPSPYKRERGSPDYGRGASPVAAYRKERTSPDYGRRRSPSPYKKSRRG
SPEYGRDRRGNDSPRRRERVASPKYSRSPNNKRERMSPNHSPFKKESPMNGVGEVDSPVE
RRERSRSSPENGQVESPGSIERRDSDGGYDGAESPMQKSRSRSPPADE
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgaagccagtcttctgtggtaactttgagtatgatgcgcgtgagggtgatctggaacgg
ctgttcaggaaatatggcaaggttgagagggtggatatgaaagctggctttgcttttgtg
tacatggaagatgaaagggatgctgaagatgccattcgtgcgcttgaccgcattgagttt
gggcgtaaaggacgaagacttcgtgttgagtggacaaagagtgaacgtggaggtgataga
agatctggtggtggttcacggagatcctcatcaggcatgagaccttccaagactctcttt
gttatcaactttgatgcggataatactaggacccgggatcttgaaagacactttgagccg
tatggaaaaatcgtaaacgttaggatcaggagaaattttgcatttatccaatacgaggca
caagaggatgccaccaaagcactggatgctacaaataacagtaagctgatggataaggtg
atctcagtggagtatgcggtgaaggatgatgatgctagaggaaatggtcacagtcctgaa
agacgccgtgataggtcacctgaaaggagaaggcgatcacctagtccttacaaaagagaa
agaggaagccctgattatggccgaggtgccagtcctgttgctgcatacagaaaggaaagg
accagtcctgactatggtagaagacgtagcccaagtccttacaagaaatcaaggcgtggc
agtcccgagtacggtcgtgaccgcagaggcaatgatagccctcgtaggagggagagagtc
gcaagccccaagtacagccgcagtcccaacaacaagagagagaggatgagccctaatcac
agcccatttaagaaggaaagtcctatgaatggagtgggtgaagttgatagtccagttgaa
aggagagagagatcgaggtctagccctgagaatggccaagttgaaagccctggctcaatt
gaaagaagagacagtgatggtggctacgatggtgcagagagcccaatgcagaagagccgg
tctcgttcgccaccagctgacgagtga
DBGET
integrated database retrieval system
