Capsella rubella (pink shepherd's-purse): 17878026
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Entry
17878026 CDS
T02984
Name
(RefSeq) protein transport protein Sec24-like At4g32640
KO
K14007
protein transport protein SEC24
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
17878026
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crb04131
]
17878026
Membrane trafficking [BR:
crb04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
17878026
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
Transposase_1
Motif
Other DBs
NCBI-GeneID:
17878026
NCBI-ProteinID:
XP_006283040
UniProt:
R0GXT8
LinkDB
All DBs
Position
Unknown
AA seq
1089 aa
AA seq
DB search
MVAPVPPGAPRPNNQQNPRPPNFYPGNSNALAGNMQNLSLNRPPPMMPGSGPRPPPPFGQ
SPQPFPQQSPSYGVPQHGPSPMSRPGPPPGMARPGGPPPVSQPAGFQSNTPLNRPTGPPP
SQPPFGSRPSMPGGPVAQPIASSSGFTAFGPSGNVAAGPPPGARPMAFGSPPPVGSGMSM
PPSGMLGGPVSNGHQMAGSGGFPRGTQFPGAAVTTPQAPYAQPPSAPFARPPPQPLGAHP
RSGNSQLTPSTPPSMPPPATFPGAPHGRPAVSGLPYGPPSSQVAPPLGFPGPMQPPRYGM
GPLPNQSMTNIPTAMGQPGASVPGPARIDPNQIPRPGSSSSPTVFETRQSNQANPPPPAT
SDYVVRDTGNCSPRYMRCTINQIPCTVDLLSTSGMQLALMVQPLALSHPSEEPIQVVDFG
EGGPVRCSRCKGYINPFMKFIDQGRKFICNFCGYTDETPREYHCNLGPDGRRRDVDERPE
LCRGTVEFVATKEYMVRDPMPAVYFFLIDVSMNAIQTGATAAACNAIQQVLSDLPEGPRT
FVGIATFDSTIHFYNLKRALQQPLMLIVPDVQDVYTPLETDVIVQLSECRQHLELLLDSI
PTMFQESKTPESAFGAAVKAAFLAMKSKGGKLMVFQSNLCSVGVGALSSREAEGRANMSA
GEKEAHKLLQPADKILKTMAIELAEYQVCVDIFITTQAYVDMASISVIPRTTGGQVYCYY
PFSALSDPPKLYNDLKWNITRPQGFEAVMRVRCSQGIQVQEYSGNFCKRIPTDIDLPAID
CDKAIMVTLKHDDKLQDGAECAFQCALLYTTIYGERRIRVTTLSLSCTNMLSNLFRAADL
DSQFACMLKQAANEIPSKALPLVKEQATNSCINALYAYRKFCATVTSTGQLILPEALKLF
PLYTLALTKSVGLRTDGRVDDRSFWINYVSCLSTPLAIPLVYPRMISVHDLDVKDNEGEV
LPPPIPLSSEHISNEGVYFLENGEDGLLYVGESVDSDILQKLFAVPSAAEIPNQYVLQQY
DNQLSKKFNDAVNEIRRQRCSYLRIKLCKKGDSSGMLFLSYMVEDRTASGPSYVEFLVQV
HRQIQLKMN
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atggttgctcctgtgcctccaggggcacctagacccaacaaccagcagaatcccaggcca
ccaaatttctacccggggaactcaaatgctttagctggcaatatgcagaatttgagcttg
aatcgaccacctccgatgatgcctggttcaggtcctagaccaccccctccgtttggtcag
tcaccacaacctttccctcaacaatccccttcttatggagttccgcaacatgggccttca
ccgatgtcccggcctggacctcctcctgggatggcaagacctggtggtccccctcccgta
tcacaaccagctggatttcagtcaaacacacccttgaacagacccactggtccgcctcct
agtcagccaccatttggctctagaccgtcaatgcctggaggacctgtggcgcagcctatt
gcctcttctagtggttttacagcttttggtccatcaggtaatgtagctgcaggtcctcct
ccgggagctcgcccaatggcatttggttcacctccacctgtcggatctggcatgtctatg
cctccctcgggcatgcttggtggtccagtcagtaatgggcatcaaatggctggttcaggc
ggatttccgaggggaacccagttccccggtgctgctgttacaactccacaggcaccctat
gcgcagcctccttcagcacctttcgctcggcctcctccacagccactaggtgcacatcct
cgttctggaaattcgcaattaactccgtctactcccccttcaatgccgccaccagcaacc
tttcctggagcccctcatggcagaccagcggtatcaggcttgccttatggtccaccatca
tcacaggttgccccacctctaggctttcctggcccaatgcaaccaccaagatatggaatg
gggcctttgccaaatcagtcgatgaccaacatacccactgccatgggccaacctggtgcc
tctgttcctggacccgcaagaattgatcctaatcaaatcccaaggccaggttcaagctcc
agcccaacagtctttgaaacacgtcagagtaatcaggctaatcctcccccgcctgctact
agtgattatgttgttcgagacaccggaaattgtagtccgcgttacatgaggtgcacgatc
aatcagatcccatgtacagttgatcttctatctacatctggaatgcaactggcgttgatg
gttcaaccgctggcgctttctcatccatctgaagagcctatacaagttgtggactttggt
gagggtggacctgtacgatgttcacgctgtaagggttacataaatcctttcatgaagttc
attgaccagggaaggaagttcatctgtaatttctgtggatacactgatgagactccccgt
gaatatcactgtaatctgggtccagatggtaggcgtagggatgttgatgaaagacctgag
ctgtgtaggggaactgttgagtttgttgctacaaaagaatacatggtacgggatccaatg
ccagcagtatattttttcctcattgatgtctcaatgaatgctatacaaacaggtgctact
gcagctgcttgcaatgcaattcagcaagtactttcagaccttcctgaaggtcctaggaca
tttgttggaattgctacatttgactcaacaatccacttctataatttgaaacgtgcactg
cagcagccattgatgctcattgtccctgatgtgcaagatgtttatacacctttagagaca
gatgtcattgttcagctatctgagtgccgtcaacacctggagcttttgctggatagtatc
ccaacgatgtttcaggaaagtaaaactcctgaatctgcttttggtgcagcagttaaggct
gctttcttggcgatgaagagcaaaggagggaagcttatggtatttcaatcaaatttgtgt
tctgttggtgttggagcactttcttctagagaggctgaagggagagctaacatgtctgct
ggtgaaaaggaggcccataaattactacagccagcagacaaaattctaaagaccatggct
attgaacttgctgagtaccaggtctgtgtagatatatttatcacaactcaggcctatgtt
gacatggcttcaatatccgtcattccaagaactactggcggacaggtgtattgttattac
cctttctcagctctctcagatcctcccaagctttacaatgatcttaaatggaatattact
aggccacagggttttgaggctgtcatgcgagtcagatgcagccagggtattcaagtgcaa
gaatactcagggaatttctgcaaacgcattccaactgacattgatctcccagcgattgac
tgtgacaaagctataatggtgacgttaaagcatgatgacaaactacaagatggagctgaa
tgtgctttccagtgcgcccttctgtatactaccatatatggagaaagaagaatcagggtt
accacattatcactttcttgtacgaacatgctcagtaatttgtttcgcgcagctgaccta
gattctcagtttgcttgtatgctgaaacaagcggcaaatgaaattccttcaaaggcactt
ccattggtaaaggagcaagcaactaatagttgcatcaatgcactctatgcctaccgtaaa
ttttgtgctacagtgacgtcaactggacaacttattcttcctgaggcgctcaagcttttt
ccattatatactcttgcattgaccaaaagtgtgggtttaagaacggatgggagagttgat
gatcgatcattctggatcaactatgtgtcttgcctttctactccgttggcaatcccattg
gtttatcccaggatgatttctgtgcatgaccttgatgtgaaggacaatgaaggagaggtc
cttcctcctccaatcccattgtcaagtgaacacattagcaatgagggagtctattttctt
gagaatggtgaagatggtctactatatgttggcgaatctgtggactccgatatcctgcag
aaactttttgctgttccttcagctgctgaaattcctaaccagtatgtgctgcagcagtat
gataatcagttatcaaagaagtttaatgatgcggtgaatgaaataaggaggcaaagatgt
tcttacttaagaataaaattgtgcaagaagggagattcatcaggaatgttgtttctctcg
tatatggtagaggataggacagcaagcggcccatcatatgtggagttcctcgtgcaagtc
catcgccaaatccaactcaaaatgaactga
DBGET
integrated database retrieval system
