Capsella rubella (pink shepherd's-purse): 17878032
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Entry
17878032 CDS
T02984
Name
(RefSeq) uncharacterized protein LOC17878032
KO
K06001
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb00260
Glycine, serine and threonine metabolism
crb00400
Phenylalanine, tyrosine and tryptophan biosynthesis
crb01100
Metabolic pathways
crb01110
Biosynthesis of secondary metabolites
crb01230
Biosynthesis of amino acids
Module
crb_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
17878032
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
17878032
Enzymes [BR:
crb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
17878032
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PALP
Motif
Other DBs
NCBI-GeneID:
17878032
NCBI-ProteinID:
XP_006283566
UniProt:
R0GI12
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All DBs
Position
Unknown
AA seq
507 aa
AA seq
DB search
MASQLLLPPNSFTKSVSSPKVFFTGDCQGLNDVTLKRRWKQETRVSNGFSLRAKAALRSD
TNKSVVEIPKQWYNLVADLSVKPPPPLHPKTFEPIKPEDLAHLFPNELIKQEATQERFID
IPEEVLEIYKLWRPTPLIRAKRLEKLLQTPARIYFKYEGGSPAGSHKPNTAVPQAYYNAK
EGVKNVVTETGAGQWGSSLAFASSLFGLDCEVWQVANSYHQKPYRRLMMQTWGAKVHPSP
SDLTEAGRRILELDPSSPGSLGIAISEAVEVAARKEDTKYCLGSVLNHVLLHQTIIGEEC
IQQMENFGETPDIIIGCTGGGSNFAGLSFPFIREKLKGKMNPVIRAVEPSACPSLTKGVY
AYDFGDTAGLTPLMKMHTLGHDFIPDPIHAGGLRYHGMAPLISHVYEQGFMEAISIPQIE
CFQGAIQFARTEGIIPAPEPTHAIAATIREALRCKETGEAKVILMAMCGHGHFDLTSYDK
YLQGELIDLSFSEEKIRESLSKVPHVV
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggcctctcaattgcttttgcctccaaactcattcaccaaatcagtctcatcacctaaa
gttttctttactggtgattgtcaaggattgaatgatgtaactcttaaaagaagatggaag
caagaaacaagggtttcaaatgggtttagcttaagagctaaagcagctttgagatctgat
accaacaaatcagtcgttgagattccaaaacaatggtacaatcttgttgctgatctttca
gtcaagcctcctccaccgttgcatccaaagacttttgaaccgatcaaacctgaagatttg
gctcatcttttccctaatgagttaattaaacaagaagcaactcaagagaggtttattgat
atccctgaggaagttcttgaaatctataagctttggcgtccaactcctctaatcagagca
aagagattggagaagcttcttcaaacacctgcaaggatttacttcaaatatgaaggtggt
agcccagctggttctcacaaacccaacacagcagttccgcaagcttattacaatgcgaaa
gaaggtgtcaagaacgttgtgacagaaaccggcgctggccaatggggaagttctttagca
tttgcttctagtctgtttggccttgactgtgaagtatggcaagttgccaactcgtatcac
caaaagccatatcgccggttaatgatgcaaacttggggtgcaaaggttcatccatcacca
tctgatctcactgaggcgggtagaagaatcctcgaattagatccttcaagtccgggaagt
ttaggcattgcgatttcagaagctgttgaagttgctgcaagaaaagaggatacaaaatac
tgtctagggagtgtactgaaccatgtgttgttacaccaaacaattattggagaagaatgc
attcaacaaatggagaattttggcgaaacgcctgatattatcatcgggtgtactggtgga
ggatcgaattttgctggtttgagttttccttttatccgggagaaactcaaaggcaagatg
aatcctgttatcagagcggttgagccttcggcttgtccttccttgaccaaaggggtttac
gcttatgatttcggcgatacggctggactaactcctttgatgaagatgcatactttagga
catgacttcattcctgatcctatccacgcaggtggactgcggtaccatgggatggcaccc
ttgatttcacatgtttatgaacaaggtttcatggaagcaatatcaattcctcaaatagag
tgtttccaaggtgctattcagtttgcaagaacagaaggtataataccagcgcccgaaccg
actcatgccattgccgcaaccataagagaagctctccgatgcaaagaaacaggagaagca
aaagtgatactaatggctatgtgtggacatggccacttcgaccttacctcttacgacaag
tatttacaaggcgaattgatagatttatcattcagcgaagagaagatacgagagtctttg
tccaaagttcctcatgttgtttag
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