Capsella rubella (pink shepherd's-purse): 17878171
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Entry
17878171 CDS
T02984
Name
(RefSeq) farnesyl pyrophosphate synthase 2
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb00900
Terpenoid backbone biosynthesis
crb01100
Metabolic pathways
crb01110
Biosynthesis of secondary metabolites
Module
crb_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
17878171
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
crb01006
]
17878171
Enzymes [BR:
crb01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
17878171
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
17878171
Prenyltransferases [BR:
crb01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
17878171
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
DUF6052
Pfc11_Rna14-15-ID
BIG2_C
Motif
Other DBs
NCBI-GeneID:
17878171
NCBI-ProteinID:
XP_006284544
UniProt:
R0F6J8
LinkDB
All DBs
Position
Unknown
AA seq
342 aa
AA seq
DB search
MADLKSTFLDVYSILKSELLQDPSFEFTHESRQWVERMLDYNVRGGKLNRGLSVVDSYKL
LKQGQDLTDKETFLACALGWCIEWLQAHFLVLDDIMDNSVTRRGQPCWFRQPKVGMIAIN
DGVLLRNHIHRILRKHFREMPYYVDLVDLFNEVEFQTASGQMIDLITTFDGEKDLSKYSL
QIHRRIVQYKTSYYSFYLPVACALFMAGENLETHTDVKNVLVDMGIYFQVQDDYLDCYAD
PETLGKIGTDIEDFKCSWLVVKALERCSEEQTKILYENYGKSEPSNIAKVKALYKELDLE
AAFMEYEKESYEKLTKLIEAHQSKAIQAVLKSFLAKIYKRQK
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggcagatctgaaatcaacgttcctcgacgtttactccattctcaagtctgaactgctt
caagatccttcctttgaatttacccacgagtctcgtcaatgggttgaacggatgcttgac
tacaatgtacgcggcgggaagctcaatcgtggtctctccgtggttgatagctacaagctc
ttgaagcaaggtcaagacttgaccgataaagagactttcctcgcatgtgctcttggttgg
tgcattgaatggcttcaagctcattttctcgtgcttgatgacataatggacaactctgtc
acacgccgtggccagccttgttggttcagacagccaaaggttggtatgattgctattaac
gatggggttctacttcgcaatcatatccacaggattctcagaaagcacttcagggaaatg
ccttactatgttgacctcgttgatttgtttaatgaggtagagtttcaaacagcttctggc
cagatgattgatttgatcactacctttgatggagaaaaagacttgtccaagtactcgttg
caaatccataggcgtattgtccagtacaaaacatcttattactcattttatcttcctgtt
gcttgtgcattgtttatggcgggagaaaatttggaaacccatactgatgtgaagaatgtt
cttgttgacatgggaatttactttcaagtacaggatgattatttggactgttatgctgat
cccgagacacttggcaagatagggacagacatagaggatttcaaatgctcctggttggtg
gttaaggcattggaacgctgcagtgaagaacaaactaagatactatatgaaaactatggt
aaaagcgagccatcaaacattgctaaggtcaaagctctctacaaagagcttgatctcgag
gctgcattcatggaatatgagaaggaaagctatgagaagctgacaaagttgatcgaagct
caccaaagtaaagcaattcaagcagtgttaaaatccttcttggctaagatctacaagagg
cagaagtag
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