Capsella rubella (pink shepherd's-purse): 17878191
Help
Entry
17878191 CDS
T02984
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
17878191
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crb03019
]
17878191
Messenger RNA biogenesis [BR:
crb03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
17878191
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
17878191
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
S1_RRP4
ECR1_N_2
CHASE5
Motif
Other DBs
NCBI-GeneID:
17878191
NCBI-ProteinID:
XP_006282467
UniProt:
R0GSQ8
LinkDB
All DBs
Position
Unknown
AA seq
191 aa
AA seq
DB search
MTTELVTPGDVIGKATEFKAGKGAYVNDTTIYASLTGTRRIVSPLPESLDKRATVEVTGH
KAHGPIPEPGSVVIARVTKVMARMAAVDILCVGPKAVRENFAGVIRQQDVRATEIDKVDL
HQSFHAGDIVRAMVLSLGDARAYYLSTAKNELGVVSAESAAGETMVPISWTEMQCPLSGQ
TEKRKVAKVGS
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atgacgacggagctagtaacgccgggagatgtaatcgggaaagcaactgagtttaaagct
gggaaaggagcttacgtcaacgatacaaccatctacgcttccctcacaggaactcgtcgg
attgtttctcctcttcctgaatcacttgacaagagagctactgtggaagttacgggtcac
aaggctcatggtcctataccagagcctggttctgttgtcatagcaagagtgactaaagtt
atggctcggatggctgctgttgatatcttgtgtgttggtccaaaggccgttcgtgaaaat
tttgctggggtaatcaggcaacaagatgttagagcaacagagattgacaaagttgacttg
catcagtctttccatgctggtgacattgttagggctatggttctgtctcttggtgatgca
cgggcttactatttgtcgactgctaagaatgaacttggtgtggtctcagcagaaagtgct
gcaggcgaaacaatggttcctataagttggacagagatgcagtgccccttgtcgggacaa
accgagaagagaaaagttgccaaggtgggtagttaa
DBGET
integrated database retrieval system
