Capsella rubella (pink shepherd's-purse): 17878295
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Entry
17878295 CDS
T02984
Name
(RefSeq) nuclear pore complex protein NUP85
KO
K14304
nuclear pore complex protein Nup85
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
17878295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crb03019
]
17878295
03036 Chromosome and associated proteins [BR:
crb03036
]
17878295
Messenger RNA biogenesis [BR:
crb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
17878295
Chromosome and associated proteins [BR:
crb03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
17878295
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
17878295
NCBI-ProteinID:
XP_006283222
UniProt:
R0GV05
LinkDB
All DBs
Position
Unknown
AA seq
715 aa
AA seq
DB search
MPGMTSEYGGGELVPFSTKEKAPVLYPLSYGLKSPVHRLSISWGCGNNLRVTVLRNPDLR
DDDGEAGGKVVNVSLSGEDSEISDAQRRRIAYGSVSPFALLQSRRNSISSLSKMDMSSSL
YQNAWWEYVMEYSKDIKSLLSNTISSPSPLIEDPKSVIKNAEEPTSLKAAWELMELFYAD
KTCLSWLPERLVDWLSDYDILLSSSHPTIYSKLQDFQKELVGLQAIEDDPRYWEVMSAAL
SVGWLEIVVKLLHLHGSYQLDQLGSRETENGLVEAIAVLISKMPRMRPKLEDGKFGESFS
AKPDFMKTRERWQSQISKLECSAFWVQCAHHQTREGLRNMLKIMIGNADCLTAATCNWVE
LFVSHLLYLRPFTKGLDSMHSLALKCMQSKPVSTSHKLLRLLIGILGENTEVVLAECSKG
FGSWMVAHSMELLTAGSDEGEVLVHEEQRRLGGINMEELHRLVYAQVLSSHALTWQIAPI
YLASCEKQGLGLLELLFYRQPVQDNQLLIKSLEICRLYELSNVSAKLMKISGVHHWKHGR
KGSGIFWLQQARDEHCLSVISQQLFDSVGKSLSDESLKQWEGLVELLGSESQISGGLDFL
HKYRYFKRSLKLVHDGKSIDAAHEAVERLVSLMKSPSTPQRFWLPLLHDSLKLLNWPEQS
LLNVTQTNLMLNKLQELSVARLRPGFIESDLSTQAVGSVRLALATNLGRAFLDEC
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgccgggtatgacttcggaatacggcggtggagaattggttcccttttcgacgaaggaa
aaagctccggtattgtatcctctaagctacggcctgaagtctccggttcataggctctcc
atctcttggggttgcggaaacaacctacgcgtcacggttttaaggaatccggacttacgc
gatgatgacggagaagctggtggtaaggtcgtaaacgtgagtcttagcggcgaggatagc
gaaatcagtgacgcacagcggcgaaggatcgcttatggatcggtttctccgtttgcgctt
ttgcagagcaggagaaactcaatttcaagtttgtctaagatggatatgagctcttctttg
taccagaatgcctggtgggaatacgtaatggaatacagcaaggatattaaatctctcctt
agtaatacaatatcttccccctctcctctgattgaagacccaaaatcagttataaagaat
gctgaggaaccaacttcgttaaaagctgcgtgggagttgatggaattattctatgcagat
aagacatgtctgtcttggttgcctgaacggctcgttgattggctatctgactacgatata
ctcctttcaagctcacatccaacaatctactcgaagctccaggatttccaaaaggaactt
gttggcctacaggccattgaggatgatccaagatactgggaagtgatgtcagctgcttta
tcagttggttggctagaaatagtggtgaaattgttacacttacatggttcttatcaacta
gaccagctgggaagtcgtgagacagaaaatggtctggtagaagccattgctgtcctcatt
tcaaaaatgccacgaatgcgtccaaaactagaagatgggaagtttggtgaatccttttca
gcaaagcctgactttatgaagacacgagaaagatggcagtctcagatatctaaactagag
tgcagtgccttctgggttcaatgtgctcaccatcagacccgtgagggcttgagaaatatg
ctgaagatcatgataggaaatgctgattgcctcacagctgcaacatgtaattgggtggag
ctttttgtttcacatcttctatatctcaggccattcacaaagggattagacagcatgcat
agcctagccctgaaatgtatgcagtcaaagccagttagcacttcccataagcttctaaga
ctgcttattggaattcttggagaaaatactgaggttgttctggcagagtgttccaaagga
tttggctcctggatggttgcacattccatggaattattaacagctggaagcgatgaagga
gaagttcttgtacatgaggagcagcgaaggttgggtggaatcaatatggaagagctccac
agacttgtttatgctcaagttctttcttctcatgctttaacgtggcagatagctcctatt
tatctagcatcgtgcgagaaacagggattaggcttattagagttgttgttctacagacag
cctgttcaagacaatcagttgcttattaagagcctagaaatttgccgtctatatgaactc
agtaatgtcagcgctaaacttatgaagatttctggagtgcatcactggaaacatggaagg
aaagggtctggaatcttttggctccaacaagcccgggacgaacattgtctcagcgtgatt
tctcaacagctctttgattctgttggaaagtcattgtctgatgaaagtctcaagcaatgg
gaaggcctggttgagttgctaggctcggaatcacagatctctggtggtctcgattttctt
cacaagtatagatacttcaagagatcactgaagctagtccatgatggaaaaagtatagat
gcagcccatgaagccgtggagagacttgtatcgctaatgaagagcccttctactcctcaa
cgattctggcttcctcttctgcatgattcattaaagctgttgaattggccagaacagtcg
ctgttgaatgtaacacagactaacctgatgttgaacaaattacaagagctatcagttgca
agattaagaccaggcttcatagaatctgatttgtctactcaagctgtgggttctgtgaga
cttgctctagcaaccaatctcggacgtgcttttctcgatgagtgttaa
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integrated database retrieval system
