Capsella rubella (pink shepherd's-purse): 17878353
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Entry
17878353 CDS
T02984
Name
(RefSeq) long-chain-fatty-acid--[acyl-carrier-protein] ligase AEE15, chloroplastic
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb00061
Fatty acid biosynthesis
crb00071
Fatty acid degradation
crb01100
Metabolic pathways
crb01212
Fatty acid metabolism
crb04146
Peroxisome
Module
crb_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
17878353
00071 Fatty acid degradation
17878353
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
17878353
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
crb01004
]
17878353
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
crb04147
]
17878353
Enzymes [BR:
crb01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
17878353
Lipid biosynthesis proteins [BR:
crb01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
17878353
Exosome [BR:
crb04147
]
Exosomal proteins
Exosomal proteins of breast milk
17878353
Exosomal proteins of breast cancer cells
17878353
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
AMP-binding_C
GH3
Motif
Other DBs
NCBI-GeneID:
17878353
NCBI-ProteinID:
XP_006285501
UniProt:
R0GNF9
LinkDB
All DBs
Position
Unknown
AA seq
733 aa
AA seq
DB search
MSFLRSPSSYSSYLQMQLHLKPDHSFFIASSSMVASTTSLGPSTLLSYASSSRQFPDFGF
RLILGHDGVRVPSFRRFRIHCESKAKEVRPSSLVIESSLLSNEWKAVPDIWRSSAEKYGD
RVALVDPYHDPPLKLTYKQLEQEILDFAEGLRVVGVKADEKIGLFADNSCRWLVSDQGIM
ATGAVNVVRGSRSSVEELLQIYRHSESVALVVDNPEFFNRIAETFTSKASLRFLILLWGE
KSSLVSQGLQIPVYSYADIKSLGQESRANLSGSNDTSNYNFINSDDIAAIMYTSGTTGNP
KGVTLTHRNLLHQIKHLSKYVPAQAGDKFLSMLPSWHAYERASEYFIFTCGIEQMYTSIR
YLKDDLKRYQPNYIVSVPLVYETLYSGIQKQISSSSAARKFLALTLIKVSMAYMEMKRIY
EGMCLTKEQKPPMHIVAFVDWLWARVVAALLWPLHMLAKMLIYKKIHASIGISKAGISGG
GSLPIHVDKFFEAIGVTLQNGYGLTETSPVVCARTLSYNVLGSAGHPMHGTEFKIVDPET
NDVLPPGVKGIIKVRGPQVMKGYYKNPLTTKQVLNESGWFNTGDTGWIAPHHSIGRSRRC
GGVIVLEGRAKDTIVLSTGENVEPLEIEEAAMRSSLIEQILVIGQDRRRLGAIIIPNKEE
AQRVNPEITKETLKSLIYQELRKWTSECSFQVGPVLIIDEPFTIDNGLMTPTMKIRRDKV
VAKYKDEIDQLYN
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgtcctttttaaggtccccttcttcatattcatcttatctccaaatgcaacttcatctg
aaacctgatcattccttcttcatcgcatcttcttcaatggtggcgtcgacgacatcgttg
ggaccttctacgctgctttcttacgcttcttcttctcgtcaatttcctgattttgggttc
cgattgatcttgggtcacgacggtgttcgagttccctcgttccggcgatttaggattcac
tgcgagtctaaggcaaaagaagtgagaccgtcttcgctagtcattgaaagctcgttattg
tctaatgaatggaaggctgttcctgatatttggaggtcatctgcagaaaagtatggtgat
agagttgcattggtggatccttatcatgatcctcctttgaaactaacgtacaagcagttg
gaacaagaaattttggactttgctgagggattaagagttgttggagtgaaagcagatgag
aagattggactttttgctgataactcctgcagatggcttgtttcagatcaaggtataatg
gccacaggagcagtcaatgttgtcagaggatctaggtcctctgttgaagagttactgcaa
atataccgtcattctgaaagtgtagcccttgttgtggataatcctgagtttttcaaccgc
attgctgagacatttacttccaaggcatctctaagatttttgatacttctctggggtgag
aaatcttcattggtctcacaggggttgcagattccagtttacagttatgcagacattaaa
agcctaggacaggagagtcgtgcaaacttgtcaggatctaatgataccagtaactataat
ttcatcaattcagatgatatagccgcaattatgtataccagtggtactacgggaaatccg
aaaggcgttacacttacacatcggaatcttctacaccagataaaacatttatccaaatat
gtacctgctcaagctggcgataaatttctaagcatgctgccatcatggcatgcctatgaa
cgtgctagtgaatacttcatattcacctgtggaattgagcaaatgtatacgtctataaga
tacttaaaggatgatctaaaacggtatcaaccaaactatattgtttccgttcctttggta
tatgagacactttacagtgggattcaaaagcaaatttcttcaagttctgctgcacgtaaa
tttctagcacttacattgatcaaagtcagtatggcatatatggaaatgaaaaggatatat
gagggtatgtgtctgacaaaagagcaaaagcctccaatgcatattgttgctttcgtggat
tggttgtgggcaagagtagtcgctgccttattgtggccattacatatgttggctaaaatg
cttatctacaagaaaatacatgcgtctattgggatatcgaaggctggtattagcggaggt
ggtagtttacccattcatgttgacaagttttttgaggccattggggtgactttacaaaac
ggttatggtttgacagagacctcgccggttgtatgtgcacggacgcttagctataatgtt
cttggctcagctgggcatccaatgcatggtacagaattcaaaattgtagatcctgagact
aatgatgtactccctcctggtgtaaaaggcattatcaaagtcagaggtccacaagttatg
aagggttattataagaatccattgaccacaaagcaagttctaaatgagagtggatggttc
aatacaggagatacgggctggatcgctcctcatcactcaatagggcggagtcgccgttgt
ggaggtgtcattgttcttgaaggccgtgccaaggacacaattgtactatccacaggtgaa
aacgtggaaccattggagattgaagaagcagcaatgagaagcagtttgattgaacaaatc
cttgttattggacaggatcgacgccggcttggagccatcattatcccaaacaaagaggaa
gcgcaaagagtaaatcctgaaataaccaaagaaacactaaagagcttgatctaccaagaa
ctgaggaaatggacatcagaatgttcgtttcaagtcggaccagtcttgatcatcgacgag
cccttcacgatagacaacggcttaatgacaccaacgatgaagattagacgggacaaggtg
gtggctaaatacaaagacgagattgaccaactctacaattag
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