Capsella rubella (pink shepherd's-purse): 17878356
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Entry
17878356 CDS
T02984
Name
(RefSeq) transmembrane E3 ubiquitin-protein ligase 1
KO
K23788
transmembrane E3 ubiquitin-protein ligase [EC:
2.3.2.27
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
crb04121
]
17878356
Enzymes [BR:
crb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
17878356
Ubiquitin system [BR:
crb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
17878356
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_5
zf-C3HC4_2
zf-RING_11
zf-C3HC4_3
zf-C3HC4
PHD_NSD
DUF2921
zf-ANAPC11
zf_RING_Vps8
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
17878356
NCBI-ProteinID:
XP_006285362
UniProt:
R0H0W8
LinkDB
All DBs
Position
Unknown
AA seq
564 aa
AA seq
DB search
MKKRDNSGLLGLRFEWQVIFWLLILLAISQQATGLRPIREKTRSWSDEWLFGRKQEAEVG
PFSAWNITGTYRGTWKFLNSANSSSKFQDFQKENGNSVVELVAVPTKITGVHYVQGVVVF
HDVFDNEQNVGGAQINLEGVYIWPFRQLRLVANSGKESNSGQEDNNLLSNPYHLLGIFSS
QVFQESPRDRLLRRKISPVNEMEKHCNIEIAAQVSRVASSENNGDKNYYHMEGLLESPGA
GDDGNCFSPLLLNATSVNVEVYYNKAVNYTLMVTFVSFLQVLLLIRQMEHGNTHSGAAKV
SIVMIGQQAIMDAYLCLLHLTAGILVESLFNAFATAAFFKFVVFSIFEMRYLLAIWKATR
PSNSGEGWETMRRELSFLYSRFYGILLGGILIMYQFHNYMQPILLLMYSFWIPQIVANVV
RDSRKPLHPYYILGMTVTRLAIPLYVFGCPHNFMRVEPNKFWCVCLCTFMGLQAAILLLQ
HYFGSRCFVPRQMLPEKYNYHRRFNRDVNHNTDCVICMTAIDLRQHTSDCMVTPCEHFFH
SGCLQRWMDIKMECPTCRRSLPPA
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagcgggacaattcggggcttttgggattaaggttcgagtggcaggttatcttc
tggctattgattttgttggcgatttcgcaacaagcgacgggattgagacccataagggag
aaaactcgatcatggagcgacgagtggctctttggtagaaaacaagaggctgaagtagga
ccgttttccgcatggaatataacaggaacatatagaggaacttggaagtttctgaactcc
gcaaatagctcttcaaagtttcaagactttcaaaaagaaaatggtaattctgtggttgag
ttagtggcagttccaacgaaaataaccggtgtgcattatgttcagggtgtagttgttttc
catgacgtatttgacaatgaacaaaatgtgggtggtgcccaaataaatctggaaggtgta
tatatatggccctttagacaactccgccttgtggctaatagcggcaaggagagcaactca
gggcaagaagacaataatcttctctcaaatccctatcatctgctaggaattttctcctct
caagtgtttcaagaatctccaagagacagattactgagacggaaaatttctccagtgaat
gaaatggagaagcactgtaatattgaaatagcagctcaagtatcccgtgtggcttctagt
gaaaataatggagacaaaaattattatcacatggaagggttgctggaaagtcctggggca
ggcgatgacggaaattgtttctcgcctttgttactgaatgcaacctctgtaaatgtcgaa
gtctactataacaaagctgtgaactatacgctgatggttacttttgtctcgttcctccag
gttcttttgttaatccgacaaatggagcacggtaacacacattctggtgctgccaaggta
tctattgtaatgattgggcaacaagctatcatggatgcttatttgtgccttttacatctc
acggctggtatattagtcgaatctctgtttaatgcatttgcaaccgctgcgttcttcaaa
ttcgtagtcttttcgatttttgagatgagatatcttctggcgatatggaaagcaacccgt
ccttccaacagcggagaaggttgggaaacaatgaggcgagaactgtcctttctctacagc
cgtttctatgggatacttcttggaggcattttgataatgtaccagttccacaactacatg
cagccgattctccttctcatgtactcattttggataccacagatagttgccaatgtcgtc
cgggattcaagaaagcctctgcacccttattacatcttggggatgacagttacacggtta
gctataccgttatatgtttttgggtgcccacacaacttcatgcgtgtagagcccaacaag
ttctggtgcgtatgcttgtgcacattcatggggttgcaagctgccattcttcttcttcag
cattattttggttcacgttgctttgttccgcgtcagatgctaccagagaaatacaactac
caccgaagatttaatcgggacgtaaaccacaacactgattgcgttatctgcatgaccgct
attgatctcagacagcataccagtgattgcatggtaactccatgtgaacatttcttccac
tcgggctgcttacagagatggatggatataaaaatggagtgcccaacttgccggcgttct
cttcctccagcatag
DBGET
integrated database retrieval system
