Capsella rubella (pink shepherd's-purse): 17878405
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Entry
17878405 CDS
T02984
Name
(RefSeq) WD-40 repeat-containing protein MSI5
KO
K10752
histone-binding protein RBBP4
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03082
ATP-dependent chromatin remodeling
crb03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
17878405
03083 Polycomb repressive complex
17878405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
crb03036
]
17878405
Chromosome and associated proteins [BR:
crb03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
17878405
Histone modification proteins
HAT complexes
HATB complex
17878405
HDAC complexes
Sin3A-HDAC complex
17878405
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
17878405
PRC2.2
17878405
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
17878405
Heterochromatin formation proteins
Other heterochromatin formation proteins
17878405
Chromatin remodeling factors
NuRD complex
17878405
NuRF complex
17878405
NuRF complex (fruit fly)
17878405
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_EML_2
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_EML
WDR55
EIF3I
Beta-prop_DCAF12
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
WD40_RFWD3
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
Beta-prop_SCAP
Beta-prop_IP5PC_F
ANAPC4_WD40
Beta-prop_LRRK2
Motif
Other DBs
NCBI-GeneID:
17878405
NCBI-ProteinID:
XP_006283576
UniProt:
R0GI22
LinkDB
All DBs
Position
Unknown
AA seq
490 aa
AA seq
DB search
MESEEADSVQVQATRPRRVPRTPVTAIVLKKRVRKPKNNEDSHQSTFSKVESHKATVEDK
HAQWKTLLPVLYDSFANHTLVWPSLSCRWGPKLEQAASKTQRLYLSEQTNGSVPNTLVVA
NCEAVNRQLNEEAYSPLVKKFKTIIHPGEINRIRELPQNSKIVATHTDSPDVLIWDTETQ
PDRHAVFGAPHSRPDLLLTGHQDNAEFALAMCSTEPFVLSGGKDKSVVLWSIQDHITMAG
TDSKSPGSSFKQTGASNNKISGPSVGPRGVYHGHENTVEDVAFCPSSAQEFCSVGDDSCL
MLWDARNGTGPTMKVEKAHDADLHSVDWNPHDNNLILTGSADDTVRVFDRRNLTANGVGS
PVYTFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYDRVGKKFERAPKSPAGLLFQH
AGHRDKVVDFHWNVLDPWTIVSVSDNCESSGGGGTLQIWQMSDLIYRPEDEVFTELEKFK
SHVFTCTSKP
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggagagcgaagaagcagattctgttcaagttcaagccaccaggcccagaagagtacct
aggactccggtaacggccattgtgctgaagaagagagttcgtaaacctaagaacaatgaa
gactctcatcagtcaactttttctaaagtagagagtcacaaggccactgttgaggacaag
cacgctcagtggaagactcttcttcccgttctctatgattcgtttgccaaccataccctc
gtctggccctctctctcttgcagatgggggccaaagcttgagcaagcagcttcgaagact
caacgactctatctctcagaacaaactaatggcagtgtgcctaatactttggtcgtagcc
aattgcgaagctgttaataggcagcttaatgaagaggcttactctccattggtgaagaag
ttcaagaccattatccaccctggagagatcaacagaatcagggaactcccacaaaatagc
aagattgtagctactcacaccgacagtcctgatgttctcatttgggacactgagactcaa
ccagacaggcatgctgtgtttggagctccacattctcgtccggatttgttactaactggg
catcaagataatgctgaatttgctcttgcaatgtgctcaaccgaaccttttgttctctct
ggaggcaaggacaagtctgttgttctgtggagcatccaagatcatatcacaatggctggt
acggattccaaatcccctggatcaagcttcaaacagactggtgcaagtaataataaaatt
agtggtccttctgttggccctcgaggcgtatatcatggccacgagaatacagttgaagat
gtggcattttgtccatctagtgcacaggaattctgcagtgttggtgatgattcttgccta
atgctatgggacgcaagaaatggtactggtcctaccatgaaggttgagaaggcacatgat
gctgatcttcattctgtcgattggaatcctcatgacaacaatctgatcttgacaggatca
gcagatgacactgtccgtgtgtttgaccgccgaaacctgactgcaaatggagttggttca
cctgtctacacatttgaaggccacaaagctgctgttctttgtgttcagtggtctcctgat
aaatcatctgtttttgggagttccgcagaagatggtctcttgaacatatgggattatgac
agggttggcaagaagttcgagcgtgcacccaaaagtcctgctgggcttctcttccagcat
gctggtcacagggacaaagtggttgacttccactggaacgtattggacccttggactatt
gtcagtgtttctgataactgtgagagtagcggtggaggtggaacattacagatatggcag
atgagtgacttgatttacagaccggaggatgaagtctttacagagctagaaaagttcaag
tcacatgttttcacatgtacctccaagccttga
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