Capsella rubella (pink shepherd's-purse): 17878513
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Entry
17878513 CDS
T02984
Name
(RefSeq) DNA (cytosine-5)-methyltransferase CMT2 isoform X1
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb00270
Cysteine and methionine metabolism
crb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
17878513
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
crb03000
]
17878513
03032 DNA replication proteins [BR:
crb03032
]
17878513
03036 Chromosome and associated proteins [BR:
crb03036
]
17878513
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
crb02048
]
17878513
Enzymes [BR:
crb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
17878513
Transcription factors [BR:
crb03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
17878513
DNA replication proteins [BR:
crb03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
17878513
Chromosome and associated proteins [BR:
crb03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
17878513
Prokaryotic defense system [BR:
crb02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
17878513
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_methylase
BAH
Chromo
Motif
Other DBs
NCBI-GeneID:
17878513
NCBI-ProteinID:
XP_006282433
UniProt:
R0F203
LinkDB
All DBs
Position
Unknown
AA seq
1245 aa
AA seq
DB search
MLSPAKCESEEARARLDLHSSSRSEPECLSLVLWVPNSEGAEMLHDDGDMSLRRSSKINC
NSPKQNGGEGGVSQRKTSRRKPQRLLMLTNGCQVRRSPRFTAAGGNFDNVCSVPVTGKSG
SRKRKSNSALEKKESSDSQGLTFKDVAGIAKCLELEIISESQYKNNVGEGRSRLPDKAKR
KVESDTSSSRINSSNQSLGCNKRTRRSPRFMKETVNEVEDYLGKSKEQGKSLASGKSFNI
FPRLSRIVENGHTETVNTIKDCGPALCGAEKVRGPEKLVQISENDNSCEAIKRCEGDGVV
SSTRELLVSASGCIKTTVNGCRDRTLGKTRSSDLNVDDIHTSSLKISNNRTSNGLIMTTG
LVEQEAMASLRQGKTSACGAANKGTTRGKHVKSTVICLSDSNEQSSGEYLYMKNLNGDVL
TQVESGSTLSCGGNEGIVSLDLNIPTKSTKRKGKWVTRTAVQEQDKRSTCFFIGEPISCE
EAQERWRWRYDLKERKSKSRGQQSEDDEDKIVANVECHYSQAKVDGHTFSLGDFACIKGE
EEENYVGKIVEFFKTTDGESYLRVQWFYRATDTVMKQQATNHDKRRLFYSTVVNDNPVDC
LISKVTVLQVSPTAGLKPNSIKSDYYFDMEYCVEYSTFQTLRNPKSSENKLECCANVVPT
ESTKPILKKKCFSGKLPVLDLYSGCGGMSTGLSLGAQISGVDVVTKWAVDQNMAACESLK
LNHPNTQVRNDAAGDFLLLLKEWDRLCKRYVFNNNNQRTDTLRSVNSTKEKSKSSSSGDD
DSDTEEYEVEKLVDICYGDPDKTGKSGLKFKVHWKGYSSNEDTWELADELSNCQDAIRQF
VTSGFKSKILPLPGGVGVICGGPPCQGISGYNRYRNVDSPLNDERNQQIIVFMDIVEYLK
PSYVLMENVVDILRLDQGSLGRYALSRLVNMRYQARLGIMTAGCYGLSQFRSRVFMWGAV
PNKNLPPFPLPTHDVIVRYGFPLEFERNVVAYVEGQPRLLEKALVLKDAISDLPPVSNDE
DREKMPYECLPETDFQRYIRSTKHDLTGSAIDNCNKKAMLLHDHRPFHVNEDDYARVCQI
PKRKGANFRDLPGLVVRNNTVCRDPSMEPVILPSGKALVPEYVFTFQQGKSKRPFARVWW
DETVPTVLTVPSCHNQALLHPEQDRVLTIRECARLQGFPDYFQFCGTMKQRYCQIGNAVA
VSVSRALGYSLGKAFHGLAGDEHLIKLPQNFSHSTYPQLKEAIPH
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atgttatcgccggcgaagtgtgaatcagaagaggctcgagctcgattggatctccattct
tcttctagatccgaaccggaatgcctctctcttgtcctctgggtacccaattcagaagga
gctgagatgctccacgacgacggagatatgagtttgaggagatcctcgaagattaactgt
aattcgcctaaacagaacggaggagaaggtggggtttcgcagaggaagacttcccgtcgt
aagccgcagcggcttcttatgctgacgaacggttgtcaagttcggaggtctccgagattt
acggcggcgggtgggaatttcgacaatgtgtgctcggttccggttaccggaaagtctggg
tcgaggaagagaaagagtaatagtgctctcgagaagaaggaaagctcagattctcaggga
ttgacattcaaagacgtagctggaattgccaagtgcctggagttggaaatcatttctgag
agccaatataaaaacaacgttggtgaaggtagatcaagattaccagataaagccaagagg
aaagttgagagtgatacatcatcgtcaagaatcaacagttctaaccagagtctcggctgc
aataaacgaacgaggagatctccaagattcatgaaggaaacggtgaacgaggtagaagat
tatctaggcaagtctaaggaacaagggaagtctctggcctctgggaagtcgttcaacata
tttccaaggctatctagaattgttgaaaatggccacacagaaactgtgaacacaataaaa
gattgtggcccagcattatgtggtgcggaaaaggtgagaggacctgagaagctggtgcaa
attagtgagaatgataattcttgtgaggcgataaagagatgtgaaggtgatggcgttgtt
tcatccacgcgagagctattagtttctgcttcgggttgcatcaagacaactgtaaatggt
tgtagggacagaacgttaggaaaaaccagatcttcggacctaaatgtggatgatattcac
actagctctttgaaaattagcaacaatcgtactagtaacggattaattatgacgaccggt
ttggtggagcaagaagcaatggcttctttacgtcagggtaaaactagtgcttgtggtgct
gcaaataagggaacaactaggggaaagcatgtaaaatctactgtgatctgtctctctgac
agcaatgaacagtcttctggtgaatatttgtatatgaaaaatttaaatggagatgttttg
acacaagtcgaaagtggatctaccctctcctgtgggggaaacgagggaatcgtttcattg
gatctgaatattccaacgaaatcaaccaagagaaagggtaaatgggtaacccgaactgct
gtccaagagcaggacaaacgtagtacctgttttttcattggagagccaatttcttgcgag
gaggctcaagaaagatggcgctggagatatgatctgaaggaacgtaaatctaagagtaga
ggccaacaatcagaagatgacgaagacaagattgttgcaaatgtggaatgccattattca
caagcaaaagtcgacgggcacacctttagccttggagactttgcctgcataaagggtgaa
gaagaagagaactatgttggcaagatagtagagttttttaagacaacagatggagagagc
tacctccgagttcagtggttttacagagcaacagatacagtaatgaaacagcaggcaact
aatcatgacaaaaggcgtctcttctattctaccgtagtgaatgacaatccagtagattgt
cttatttctaaagttactgttttacaagtttcacctacggcaggattgaagcccaattct
ataaagtcggactactattttgatatggagtattgcgtggagtattcaactttccaaacc
ttgagaaatcctaaatcgtcagaaaacaagcttgagtgctgtgccaatgtggtacctaca
gaatccactaaacctattttgaaaaagaaatgttttagtgggaagcttcctgtgcttgat
ctttacagtggttgtggtggaatgtcaactgggttaagtcttggagcccaaatatctggt
gttgatgtcgtgacgaaatgggctgttgaccagaatatggctgcctgtgagagcttgaaa
ttgaaccatccaaatacacaggttagaaatgatgctgccggagacttcctcctacttttg
aaggagtgggatagattatgcaagcgatatgtgtttaataataataatcagagaactgat
accttaagatccgtaaattcaacaaaagaaaaaagtaaaagtagctcttctggtgacgat
gattcagacactgaggagtatgaagtggaaaaactggttgatatatgctatggtgatcct
gacaagacaggaaaaagtggcttgaaatttaaggtgcactggaaaggatatagcagcaac
gaagatacatgggaactagcagatgaattgagcaattgtcaagatgccattcggcagttt
gtaactagtggatttaagtccaagatcttgccacttcctggtggtgttggtgtgatatgt
ggtggacctccatgtcaaggaattagtggctataatcggtacaggaatgttgattctccg
ttaaatgatgaaaggaaccagcaaattatagttttcatggacatagtggagtatctgaaa
ccctcgtatgtgttgatggaaaacgttgtcgatattctgcgtttggaccaaggttctctt
gggcgatatgctttgagccgtcttgtgaacatgagataccaagcaaggttaggtatcatg
acagctggttgctatggtctttcccagtttcgatccagagttttcatgtggggagctgtt
cctaacaagaacctacctccgtttccgcttccaacccatgatgttattgtcagatatggg
tttccacttgagttcgagcggaatgtagttgcttatgttgaaggccaacccagactactt
gaaaaagctcttgttctaaaagatgcgatatcagatcttcctcctgtatcaaacgacgaa
gacagggaaaagatgccttatgaatgtctcccagagacagattttcagagatacattaga
tcaaccaaacatgatttgacaggctctgcaattgataactgtaacaaaaaggcaatgcta
ctgcatgatcacaggccgttccatgtaaatgaagatgattatgcccgagtttgccaaata
ccaaagaggaagggagctaatttcagggatcttccagggttagttgtcagaaataataca
gtctgccgtgatccatcaatggaaccggttattctgccatcaggaaaggctttggtacca
gaatacgtcttcacttttcagcaagggaaatctaaaagaccttttgcccgtgtttggtgg
gacgaaacagttccaaccgttctaacagtcccaagctgccacaatcaggcgttattgcat
cctgagcaagatcgagtgctaaccataagagaatgtgcacggcttcaaggtttccctgat
tacttccagttctgcggaaccatgaaacagaggtattgtcagattggaaatgcagtggca
gtctcggtttctcgtgctttaggttattctcttggtaaggcttttcacggtctagccggc
gacgagcatctgataaaactgccccaaaacttttctcattcaacttaccctcagcttaaa
gaagccattcctcattaa
DBGET
integrated database retrieval system
