KEGG   Capsella rubella (pink shepherd's-purse): 17878529
Entry
17878529          CDS       T02984                                 
Name
(RefSeq) serine hydroxymethyltransferase 1, mitochondrial
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
crb  Capsella rubella (pink shepherd's-purse)
Pathway
crb00260  Glycine, serine and threonine metabolism
crb00460  Cyanoamino acid metabolism
crb00630  Glyoxylate and dicarboxylate metabolism
crb00670  One carbon pool by folate
crb01100  Metabolic pathways
crb01110  Biosynthesis of secondary metabolites
crb01200  Carbon metabolism
crb01230  Biosynthesis of amino acids
crb01240  Biosynthesis of cofactors
crb04981  Folate transport and metabolism
Module
crb_M00532  Photorespiration
Brite
KEGG Orthology (KO) [BR:crb00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    17878529
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    17878529
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    17878529
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    17878529
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    17878529
Enzymes [BR:crb01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     17878529
SSDB
Motif
Pfam: SHMT
Other DBs
NCBI-GeneID: 17878529
NCBI-ProteinID: XP_023634102
LinkDB
Position
Unknown
AA seq 517 aa
MAMAMALRRLSSSIDKPIRPLVRSTSCFMSSLPSEAVDEKERSRVTWPKQLNASLEEVDP
EIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDM
AETLCQKRALEAFRLDPEKWGVNVQPLSGSPANFHVYTALLKPHERIMALDLPHGGHLSH
GYQTDTKKISAVSIFFETMPYRLDESTGYIDYDQMEKSATLFRPKLIVAGASAYARLYDY
ARIRKVCNKQKAVMLADMAHISGLVAAGVIPSPFDYADVVTTTTHKSLRGPRGAMIFYRK
GVKETNKQGKEVLYDFEDKINQAVFPGLQGGPHNHTITGLAVALKQATTSEYKAYQEQVL
SNSAKFAQTLMEKGYELVSGGTDNHLVLVNLKPKGIDGSRVEKVLEAVHIASNKNTVPGD
VSAMVPGGIRMGTPALTSRGFVEEDFAKVAEYFDKAVTIALKVKSEAQGTKLKDFVSAME
SSSTIQSEIAKLRHEVEEFAKQFPTIGFEKETMKYKN
NT seq 1554 nt   +upstreamnt  +downstreamnt
atggctatggcgatggctcttcggaggctttcttcttcaattgacaaacccattcgtcct
cttgttagatccacttcttgtttcatgtcttctttgcccagtgaagctgttgatgagaag
gagcgatctcgtgtcacttggccaaaacagcttaacgcatctctagaggaggttgatcct
gagattgctgacattattgagcatgagaaagctagacagtggaagggacttgaacttatt
ccatctgagaacttcacatctgtgtcagtgatgcaagctgttgggtctgtgatgactaac
aaatacagtgaagggtatcctggtgcgagatactatggaggaaatgagtacatagacatg
gcagaaaccttatgccagaagcgcgctcttgaagctttccgtttggatcctgaaaagtgg
ggagtgaatgtgcaaccattgtctggatctcctgccaatttccatgtctacactgcattg
ttaaagcctcatgagagaatcatggcacttgatcttcctcatggtggtcatctttctcat
ggttaccagactgataccaagaagatatctgccgtgtctatcttctttgaaacaatgccc
tatcgactggatgagagcactggctacatcgactatgatcagatggagaaaagtgctact
cttttcaggccaaaattgattgttgctggtgcaagtgcttatgctcgtttgtatgattat
gcccgcatccgaaaggtgtgtaacaagcaaaaagctgtcatgctagcagatatggcacac
atcagtggtctggttgctgctggtgttatcccttcaccattcgactatgcagatgttgta
acaaccacaactcacaagtcacttcgtggacctcgtggagccatgatcttttacagaaag
ggtgttaaggaaactaacaaacaaggaaaagaggttttgtatgattttgaagacaagatc
aatcaagctgtcttccctggtcttcaaggtggtccacacaaccacactattacaggacta
gctgttgctttgaaacaggcaactacttcagagtacaaagcataccaagagcaagtcttg
agtaacagtgcaaagtttgctcagactctgatggagaaaggatatgaacttgtttctggt
ggaactgacaaccatctggttctagtgaatctgaagcccaagggaattgatggatctaga
gtggagaaagtgttggaagccgttcacattgcatccaacaaaaacactgttcctggagat
gtttctgctatggttcctggtggaatcagaatgggtactcctgctctcacttccagaggt
tttgttgaggaagactttgccaaagtagctgaatacttcgacaaagctgtgacaatagct
ctcaaagtcaaatctgaagctcaaggaaccaaactgaaggattttgtgtcagcaatggaa
tcttcttcaaccattcaatcagagattgcgaagctgcgccatgaagtcgaggaattcgct
aagcagttcccaacaatcggttttgagaaagaaaccatgaagtacaagaactaa

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