Capsella rubella (pink shepherd's-purse): 17878632
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Entry
17878632 CDS
T02984
Name
(RefSeq) methionine--tRNA ligase, cytoplasmic
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb00450
Selenocompound metabolism
crb00970
Aminoacyl-tRNA biosynthesis
crb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
17878632
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
17878632
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
crb01007
]
17878632
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
crb03016
]
17878632
Enzymes [BR:
crb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
17878632
Amino acid related enzymes [BR:
crb01007
]
Aminoacyl-tRNA synthetase
Class I (U)
17878632
Transfer RNA biogenesis [BR:
crb03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
17878632
Prokaryotic type
Other AARSs
17878632
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA_bind
Anticodon_3
tRNA-synt_1
Anticodon_1
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
17878632
NCBI-ProteinID:
XP_006283141
UniProt:
R0GGY3
LinkDB
All DBs
Position
Unknown
AA seq
799 aa
AA seq
DB search
MEDGGKSDVPKLPIPGKRNILITSALPYVNNVPHLGNIIGCVLSADVYARYCRLRGYNAI
YICGTDEYGTATETKALEENCTPKEICDKYHAIHKEVYDWFDISFDKFGRTSTPEQTEVC
QAIFNKLWENKWLSENTMQQLYCDTCKKFLADRLVEGSCPFEGCNYDSARGDQCEKCGKL
LNPTELKDPKCKVCQNTPRIRDTDHLFIELPLLKDKLEEYIKETSVAGSWSQNAIQTTNA
WLRDGLRQRCITRDLKWGVPVPHEKYKEKVFYVWFDAPIGYVSITSCYTSEWEKWWKNPE
NVELYQFMGKDNVPFHTVMFPSTQLGTGENWTLMKTISVTEYLNYEDGKFSKSKGVGVFG
NDVKDTNIPVEVWRYYLLTNRPEVSDTSFSWKDLQAKLNGELLSNIGNFVNRVLSFIAKP
ENAGYGSVIPDAPGAESHPLTISLAEKVEKLVAEYVEAMEKVKLKQGLKTAMLISSEGNF
YLQANQFWKLYKDDKPSCAIVIRTAAGLVHLLAQLLEPFMPSFSREVFKQLNLPLHFSLS
DERGEVLLASRPWEILPPSHRIGTPQPLFKELVDEEVQQYREKFAGSQADRRARDEAANL
TDQLNKTKLSDAKKQKAASSKGGGKPKPQPAAEREITMARLDIRVGKILKAEKHPKADAL
YVEEIDVGGGEIRTVVSGLVKYIPLEEMQNRMVCVLCNLKPAKMRDIVSQAMVLAASSSD
GSKVELVEPPKSATIGERVTFPGFEGEPDDVLNPKKKVWETLLVDLNTNENLVACYKDVP
FTTSAGECKVSSISNGTIR
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atggaagacggcggcaagagcgacgtccccaagttaccaatccctggaaagagaaatata
ctaatcaccagtgctcttccttacgtcaacaacgttcctcatctcggaaacatcattgga
tgtgttctgagtgctgatgtgtatgctagatactgtcgtctccgtggctataatgcgatt
tatatatgtgggactgatgagtatgggactgcaactgagaccaaagctttggaggagaat
tgtacccccaaggaaatttgtgacaagtaccatgccattcataaagaagtgtatgactgg
tttgatataagttttgacaaatttgggcgaacttcaactccagaacagactgaagtgtgc
caagcaattttcaataagttgtgggaaaacaagtggctttctgagaacaccatgcagcag
ctttattgcgatacatgcaagaagttcttagctgaccggcttgttgagggttcttgtccg
tttgaaggatgtaattatgattctgctcgtggagatcagtgtgaaaaatgtggaaagctc
ctgaatcctactgaactcaaagatccgaagtgcaaggtctgtcaaaacacaccccgaatt
cgtgacacagaccacctgtttattgagcttccgttgctgaaagataagttggaagagtat
attaaggagacatctgttgctggatcttggagtcaaaatgctattcaaacaacaaatgca
tggcttagggatgggcttagacagagatgcattacgagggatcttaaatggggagtacct
gtcccacatgagaaatataaggagaaagtcttctacgtttggtttgatgctcctattgga
tatgtctcaataacgtcatgctacacatctgaatgggagaagtggtggaagaatcctgag
aatgtggagctttatcagtttatggggaaggacaatgtgccatttcacactgtgatgttt
ccctctacgcagcttggaactggggaaaattggacactgatgaagacaatcagtgtgacc
gaatatctaaactatgaagacggaaagttctcgaagagtaaaggtgttggagtttttggt
aatgatgtaaaggatacaaatatacctgtcgaagtatggagatactacttgctgaccaac
aggcctgaggtgtctgacacatcattttcatggaaagatttgcaagcaaaactgaatggc
gagttgttaagcaacataggcaactttgttaatcgagttctgagtttcatagcaaagcct
gaaaatgcaggttatgggtctgtcattcctgatgctcctggtgctgagtctcatccttta
acaatatcactggctgaaaaggttgaaaagttggtggcagagtatgtagaagccatggaa
aaggttaagctcaagcaggggctgaaaactgctatgctgatttcaagtgaagggaacttt
tacttacaggcaaaccaattctggaaactatacaaggacgataaaccttcttgcgcaatt
gttataagaactgctgctggtttagtacaccttcttgctcaattgttagaacctttcatg
ccatccttttctcgtgaggtatttaaacagctaaatttgcctctacatttttctctctcc
gatgagaggggggaggtattactagcaagtagaccatgggagattctacctcccagccac
aggataggcacccctcaacctttgttcaaggagttggttgatgaagaagtgcaacagtac
agagaaaagtttgctggaagtcaagctgatagacgtgctagggatgaagcagcaaatttg
acagatcaacttaataaaacaaaactttcagatgccaagaaacaaaaagcagcatcatca
aaaggaggtggaaaacccaaacctcaaccggcggctgaacgtgaaataaccatggcaaga
cttgatattcgagttggtaaaattttgaaggctgagaaacatcctaaggcagatgcattg
tatgtagaagaaattgatgttggcggaggtgaaattcgcactgttgttagtggacttgtc
aaatatatacctcttgaggaaatgcagaaccgtatggtttgtgttctttgcaacttgaag
ccggcaaagatgagggatattgtgtcgcaagcaatggttcttgcagcttctagtagtgat
ggcagcaaggtggagttagttgagcctcctaaatctgctactattggagagcgagttaca
tttcccgggtttgaaggcgagccagacgatgtgttgaacccaaagaagaaagtatgggag
acactcttggtggatctaaacacaaatgagaacttagttgcttgctacaaagatgtcccc
ttcactacatctgcaggtgaatgcaaagtttcatctatcagcaatggcacgatccggtaa
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