Capsella rubella (pink shepherd's-purse): 17878637
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Entry
17878637 CDS
T02984
Name
(RefSeq) WD-40 repeat-containing protein MSI3
KO
K10752
histone-binding protein RBBP4
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03082
ATP-dependent chromatin remodeling
crb03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
17878637
03083 Polycomb repressive complex
17878637
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
crb03036
]
17878637
Chromosome and associated proteins [BR:
crb03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
17878637
Histone modification proteins
HAT complexes
HATB complex
17878637
HDAC complexes
Sin3A-HDAC complex
17878637
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
17878637
PRC2.2
17878637
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
17878637
Heterochromatin formation proteins
Other heterochromatin formation proteins
17878637
Chromatin remodeling factors
NuRD complex
17878637
NuRF complex
17878637
NuRF complex (fruit fly)
17878637
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_RIG_2nd
WDR55
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
EIF3I
Beta-prop_EML
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
WD_LRWD1
Beta-prop_HPS5
Beta-prop_SCAP
WD40_RFWD3
ANAPC4_WD40
MIOS_WD40
Beta-prop_WDR75_1st
Beta-prop_WDR35_TULP_N
eIF2A
Beta-prop_DCAF4
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
17878637
NCBI-ProteinID:
XP_006283702
UniProt:
R0GWB8
LinkDB
All DBs
Position
Unknown
AA seq
422 aa
AA seq
DB search
MAAEEGKEESGLDQVEEEFSVWKRNTPFLYDLMISHPLEWPSLTLHWVPSTPIPYAKDPS
FAVHKLILGTHTSGGAPDFLMVADVVIPTPDAEPGLGGRDQDPVVPKVEIKQKIRVDGEV
NRARCMPQKPTLVGAKTSGSEVFLFDYARLSAKPQTSECDPDLRLMGHEEEGYGLAWSSF
KEGYLLSGSQDQKICLWDVSATANDKVLNPMHVYEGHQSSIEDVAWHMKNENIFGSAGDD
CQLVIWDLRTNQMQHQVKVHEREINYLSFNPFNEWVLATASSDSTVALFDLRKLTAPLHV
LSRHEGEVFQVEWDPNHETVLASSGEDRRLMVWDINRVGDEQLEIELDAEDGPPELLFSH
GGHKAKISDFAWNKDEPWVISSVAEDNSLQVWQMAESIYREDDEDDDEEGNQNAQHSNEN
QK
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagaagaaggtaaagaggaatcgggattggatcaggtagaagaagagttctct
gtttggaaaaggaacacaccttttctctacgatcttatgatctctcacccgctcgaatgg
ccatctctaactcttcactgggtaccttctacgccgattccgtacgcgaaagatccgtcc
ttcgccgtccataagctcatcctcggtactcacacctccggtggagctccggatttttta
atggtcgccgatgtcgttattcccacacctgacgctgaaccaggattaggaggaagagat
caagatcctgtcgtccctaaggtggagattaagcaaaagatacgtgttgatggagaagtg
aacagagctcggtgtatgccacaaaagccaactcttgttggtgctaaaacaagtgggtct
gaggtgtttctctttgattacgccagactctctgcaaagccccaaactagtgagtgcgat
cctgatctgaggctaatgggacatgaagaggaaggttatggattggcttggagctccttc
aaggaaggttatcttttgagtggctcacaagatcagaaaatctgcctctgggatgtctca
gctactgccaacgataaggttttgaacccaatgcatgtatatgagggacatcaaagcagc
atcgaagatgtagcatggcacatgaagaatgagaacatatttggctctgcgggtgatgat
tgtcaattggtgatatgggacttacggacaaaccaaatgcaacaccaagtcaaagttcat
gagagagagataaactatctttctttcaatccctttaatgaatgggtattagccacagct
tcctcagattcgactgtcgccttgtttgacctccgtaagctgactgcaccattacatgtc
ctgagcagacacgagggagaagtttttcaagtggagtgggatcccaaccatgaaacagtg
cttgcatcttctggtgaggaccgaagactcatggtctgggatatcaacagggtcggggat
gagcagcttgaaatagagttggatgcagaagatggtccacctgagttgctcttctctcat
ggaggccacaaggccaagatatcagactttgcctggaacaaggacgagccttgggtcatc
tcaagtgtagctgaagacaacagtcttcaagtctggcaaatggcggaaagcatctaccgc
gaagatgatgaggatgatgatgaagaaggcaaccaaaatgcacaacattccaatgaaaac
cagaaatga
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integrated database retrieval system
