Capsella rubella (pink shepherd's-purse): 17878650
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Entry
17878650 CDS
T02984
Name
(RefSeq) DDB1- and CUL4-associated factor homolog 1 isoform X1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
crb01001
]
17878650
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
crb04121
]
17878650
Enzymes [BR:
crb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
17878650
Protein kinases [BR:
crb01001
]
Serine/threonine kinases: Other
Other
17878650
Ubiquitin system [BR:
crb04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
17878650
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40_Prp19
WD40
LisH
WD40_CDC20-Fz
Beta-prop_EML_2
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
17878650
NCBI-ProteinID:
XP_006282988
UniProt:
R0F3G2
LinkDB
All DBs
Position
Unknown
AA seq
1921 aa
AA seq
DB search
MDGQEHAEVPHPMVMDEQSFVVAEAITELSNSTGEADPGEGGQQEGGEESVDDKLIAEAQ
QHMDNITSVANNPNPKFIHALSHLLESQESLFLEENGHFSNARASHNSGKLCNLIRENDE
FFELISSTFLSENAYSTAVKAASARLLMNCSLTWMYPHVFDDAVTDNFKNWVMEEAVKFP
GEDSARKEASDSEMLKTYSTGLLALSLVSRGQLVEDVLTSGLSAKLMHYLRVRVIGEPST
SRRDALHTTETKHVSLKTKEGSRVRKVVDTVEGDHILEMDSGRETVQSDVRSDGELETDG
RERFNVSGVVDSKMKPMDENSGRDDPSRHRLNRSKSRGRGRVNEGAADTEGLLTSPRSGR
LVVRDRELSKFSDGRNAEDVTICLGKMNTGIMEIEREDNDECFQGCVIGTKNITDLVKRA
VGAAETEARAAHAPDDAAKAAGDAAAELVKTAALEEFKSSGSEEAAVSAATRAAITVIDA
AEVSRNPTCVTSDQTTDLNNVETHAIADVSEVSLPDIESLAQLQEKYCILCLEILGEYVE
VLGPVLHEKGVDVCIMLLERTSQFDGSSTVSPLLPDVMKLICALAAHRKFAAMFVDRGGI
QKLLAVPRVSETFYGLSSCLYTIGSLQGIMERVCALPSDLIHQVVKLAIELLDCSQDQAR
KNSALFFAAAFVFRAILDAFDAHDSLQKLLAILKDAASVRTGANSDRSAPEVMTSSEKQM
AFHTCFALRQYFRAHLLLLVDSIRPSRSSRGGVRNVPNIRAAYKPLDISNEAVDAIFLQL
QKDRKLGPTFVRTQWPAVNNFLASSGHVTMLELCQTPPVDRYLHDLLQYAFGVLHIVTSI
PDGRKAIAHATLSNNRAGIAVILDAANISNSIVDPEIIQPALNVLINLVCPPPSLSNKPL
LAQNHQPVPGQATARPSTDGSLGTQSTGNAPQTPVAPASSGLVGDRRIFLGAGTGSAGLA
AKLEQVYRQAREAVRGNDGIKILLKLLQPRIYVNPPATPDCLRALACRVLLGLARDDTIA
QILTKLEVGKSLSELIRDSGGQSSGTDQGRWQAELAQVALELIGIVTNSGHATTLTASDA
ATPTLRRIERAAIAAATPITYDSKELLLLIHEHLQASGLGETATALLKEAQLTPLPSLAS
PSSIAYSSTQEMSTPLAQEQWPSGRANSGFFTSKPKVCTYEEDSRCNVALSAKKKHLASS
TQEMPTPVSQQQWPSGRASGGFCPSIPKINARDEDPSSRGNAAPSAKKKQLTFSPSFSLQ
SRKQSFFHDAQPQSTQRINSSSNFDPAWADTSETAAELVFKNDLDADAQFKTPVSFPRKR
KMSELKDPELSVSGKRINLGELVPRSPACPTTAPLRRNSTIVDGSGLLTPTSALDANQSG
SSRLGQMTPASQLRLPNDPQPSNPERLSLDSLVVQYLKHQHRQCLAPITTLPPVSLLHPH
VCPEPKRLLEAPLNITGRLGTRELQSFYSGVHGNRRDRQFVFSRFKSWRSFRDETALFTC
IALLGGTNHLAVGSHAGEMKIFEASSGSLLESFQGHQAPVTLVQPHVSGDTQLLLSSSSS
DVQLWDASSITGGPRHSFDGCKAAKFSNSGLRFAALSCEASTKDVLLYDVQTCTPCDKLT
DTVTSSRSNPYSLVHFSPCDTLILWNGVLWDRRVPEKFRRFDQFTDYGGGGFHPSRNEVI
INSEVWDMRNFKLLRSVPSLDQTAITFNSRGDVIYAMLRRNIEDVMSAVHTRRVKHPLFA
AFRTLDAINYSDIATIPVDRCLLDFATEPTDSFLGLITMEDQEDMFSSARMYEIGRRRPT
DDDSDPDDDDETEDEDEDDDDEEDDLDRILGLGGDDSDSGDDDISSDDNEDSVSEFDDDD
DGGMLLEDVGGLVGFITEGVDEDDDNGGDDEDGDEDEDDDDGEEDFLSSGEEDYRDNIRS
S
NT seq
5766 nt
NT seq
+upstream
nt +downstream
nt
atggacgggcaagagcatgccgaagtacctcatccgatggttatggatgaacaatcgttt
gttgtggcggaggcgattacagagttgtcgaattcaaccggggaagctgaccccggagaa
ggaggacaacaggaaggaggagaagagagtgtggatgacaaactaatagccgaggcacag
cagcatatggacaatattacttccgttgctaataaccctaatcctaaattcattcacgct
cttagccatctcctagaatctcaggagtctctgttcttagaggagaatggacatttctcc
aatgctcgcgctagtcataacagtggcaagctgtgtaatctcatccgagaaaatgatgag
ttttttgagttgatatcctcaacttttctatctgaaaatgcttactcaaccgctgtaaag
gcagcctctgcaaggttgctaatgaactgttcgcttacttggatgtatcctcatgttttc
gacgatgctgttacggataactttaaaaattgggttatggaagaggcagtcaagtttcct
ggtgaagactctgccagaaaggaagcctcagattccgaaatgttaaagacatattctaca
ggccttcttgctctctctctggtgagtcgtgggcaattagttgaagacgtgttgacatca
ggactatctgccaagcttatgcattatcttcgagtacgagttattggagagccaagtaca
agccgtagagatgcccttcacacaactgagactaagcacgtgtccttaaaaacaaaagaa
ggaagtagggtgcgtaaagttgtggatacagttgaaggtgaccatattcttgagatggac
tctggcagagagacggtacaatctgatgtacggtctgatggcgaacttgaaaccgatggc
agagaaagatttaatgtttcaggtgttgttgattctaaaatgaaacctatggatgaaaat
agtggtagagatgacccttcaagacacagactgaatagatcaaagtcgagggggagagga
agggttaatgaaggtgcagctgatacagaaggtctcttgacatctcctagatcaggtcgt
ctagttgtcagagatagggaactatcaaaattttcagatggcagaaatgccgaagatgtg
accatatgtctggggaaaatgaacactggtattatggagatagaaagagaggataatgat
gagtgctttcaaggttgcgttataggaaccaaaaacataactgatttagtaaagagagca
gttggagctgctgaaaccgaagccagagctgcccatgctcctgatgacgcagctaaagca
gctggcgatgctgcagcagagcttgttaaaactgctgctttggaggaattcaagtcttct
ggcagtgaagaagctgctgtctctgctgctactcgagcagctattacagtcatagatgcc
gctgaggtttcaagaaatcctacttgcgtcacatctgatcagactacagatttaaataat
gtggaaacacatgcaattgcggatgtcagtgaagtttcacttccggatattgaatcgttg
gcccagttacaagaaaagtattgcatcctgtgccttgagatactgggagaatatgtcgag
gttctcgggcctgtactccatgaaaaaggtgttgatgtatgcattatgctgctggaacgt
acatcccaatttgatggcagttccacagtttctcctttgttacctgatgtcatgaagtta
atttgtgctttggctgcacaccggaagtttgctgcgatgtttgttgaccggggtggcata
caaaaattacttgctgttccaagggtttctgagaccttttatggactctcatcttgctta
tacaccattggctctcttcagggtataatggagcgtgtctgtgcacttccatcagatctc
atacatcaagttgttaaattagccattgaacttctcgactgttctcaggatcaagccaga
aagaattcagcattattctttgctgctgcttttgtcttcagagccattttagatgcattt
gatgctcatgatagtttgcagaaactccttgcaattcttaaagatgcagcctcagttaga
actggtgctaactctgaccgatcagctcctgaagtcatgacctcctcagagaaacagatg
gcttttcacacttgttttgctttgcgccaatattttagagctcatcttcttttgcttgtt
gattcaatccgtcctagcagaagtagccgaggtggtgtgcgaaatgtccctaatataagg
gcagcctataagccccttgacatcagcaatgaagctgttgatgccatcttccttcagtta
cagaaggataggaagttgggtccgacctttgtgagaactcagtggcctgctgtcaataac
ttcttggcctcctctggacatgttaccatgttggaactatgtcagactccaccagtagac
cgttatctgcatgatctgcttcagtatgcttttggtgttcttcacatagtcacatcaata
cctgatggccgcaaagcaattgcgcatgccacactcagtaacaatcgtgctggcattgct
gtcattctggatgcagcaaatatttccaacagtatagtagaccctgagatcatacagcct
gcactaaatgtcctaatcaatctggtgtgcccaccaccatcattaagcaataagccactg
cttgcacaaaatcatcaacctgttccgggtcaagccactgcccgtccctctactgatggt
tctctaggtactcagtccactggtaatgctccgcaaactcctgttgcaccagcgtcttca
ggtttggttggggatcgaagaattttcttaggagcaggaactggttctgctggccttgct
gccaagttggagcaggtttatcgtcaagcccgtgaagctgttcgtggaaatgatggtata
aaaattctcttaaaacttcttcagcccagaatatatgtgaatccccctgctaccccagat
tgtctacgagccctggcttgcagggtacttcttggtttagctagagatgatacaattgca
caaatactgactaaacttgaggttggaaagagtttatcagaactaattcgggattcaggt
ggtcagtcgagtggcacagatcagggcagatggcaagctgaacttgctcaggtggcgctt
gagctaatagggatagtgacaaattcagggcatgcaactacactaacagccagtgatgct
gctactccaacactgaggcgcattgagagagctgccattgcagctgcaacgcctataact
tatgattcgaaggagcttttactccttatccatgagcacctccaggcatcaggtcttggt
gaaactgctacagctctactaaaagaggctcaattaactcctctaccttcattggcttct
ccttcttctattgcatattcctctacgcaggagatgtctacgccgctagctcaggaacaa
tggccctctggccgagctaacagtggatttttcaccagcaagcccaaagtttgtacatat
gaagaagattccagatgtaatgtggctctatctgccaagaagaagcatttggcttcctca
acacaggagatgcccacaccagtatcacaacaacaatggccctcaggccgtgctagcggt
ggattttgccccagcatacccaaaatcaatgcacgtgatgaagatcctagttcgagaggt
aacgcagctccatctgcaaagaagaagcagttgactttttcccctagctttagtttgcag
tcacgaaagcaatctttctttcatgacgctcaacctcagtctacacagaggataaatagt
agttcaaattttgatcctgcttgggcagatacatcagaaactgctgcagaattagttttt
aagaacgaccttgatgccgatgctcaatttaagaccccagtttcctttccgagaaaacgg
aaaatgtctgagcttaaagacccagagttgtcagtttcgggtaaaagaatcaacttgggc
gagctagtaccacgatctccagcttgcccaaccactgctcccttacgtaggaattcaacc
attgtggatggctcaggtttgctaacaccaacttcagctttagatgccaaccaatctggg
agctccagactgggccaaatgacacctgcttctcagctaagacttcccaatgatccccag
ccttcaaatccagaacggttatcactagactcccttgtggttcagtatttgaagcaccaa
cacaggcagtgcctagctccaatcacaactcttccccctgtgtctctcctacatccgcat
gtctgtcctgaacctaaacgattacttgaagctccgctaaacatcactggccgtcttggt
acccgtgagcttcaaagtttctacagtggagtccatgggaatcgaagggatcgtcaattt
gttttcagcagattcaaatcttggagatctttccgggatgagactgctctctttacatgc
attgcacttcttggaggtactaatcatttagcagtaggtagtcatgctggagaaatgaag
atatttgaagctagcagcggtagcttgcttgagagcttccaaggtcaccaagctccggtt
acacttgttcagccgcatgtctctggtgatactcagttgttgctttcttcaagctccagt
gatgtgcagttgtgggatgcgtcttctataactggtgggcctagacactcctttgatgga
tgcaaggctgcaaaattcagcaactctgggctacgttttgcagcgctttcttgtgaagca
tcaacaaaagatgttcttctatatgacgtacagacatgcactccttgcgataaactcacg
gacacagtcacatcttccagaagtaatccttattctcttgtacacttcagcccttgcgat
acactgatattgtggaacggtgtactctgggaccgccgtgtcccagagaaattcagacgg
tttgatcaatttactgattatggcggtggtggctttcatccttctaggaatgaggtgatc
ataaactcagaggtctgggacatgaggaatttcaagcttcttcgaagtgtaccatcactg
gaccagacagctattacgttcaactccaggggagatgttatatacgcaatgctgaggaga
aacattgaggacgttatgtctgctgttcacacacgacgagtgaagcatcccttgtttgct
gctttccgcactcttgatgcaatcaactactcagacattgccactatacctgtcgaccga
tgtcttcttgactttgccacagaaccaacagattcgttccttgggctgatcacaatggaa
gaccaagaagatatgttttcctcggccaggatgtatgagattgggagacggaggccaaca
gatgatgactccgatcctgatgatgatgatgagacggaggatgaagacgaagatgatgac
gacgaggaagatgatctggaccgaattcttggactaggtggagatgatagcgatagtgga
gatgatgatattagtagcgacgacaatgaagatagtgtgagcgaatttgatgatgatgat
gatggagggatgctccttgaagatgttggtggtctagtggggtttataactgagggtgtg
gatgaagatgatgataatggtggggatgatgaagatggagatgaagatgaagacgatgac
gatggtgaggaggatttcttgagcagtggcgaagaggattatagagacaacattcgttcg
tcttga
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integrated database retrieval system
