Capsella rubella (pink shepherd's-purse): 17878881
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Entry
17878881 CDS
T02984
Name
(RefSeq) DNA mismatch repair protein MSH4
KO
K08740
DNA mismatch repair protein MSH4
Organism
crb
Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
crb03036
]
17878881
Chromosome and associated proteins [BR:
crb03036
]
Eukaryotic type
Meiosis-specific proteins
Others
17878881
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
Motif
Other DBs
NCBI-GeneID:
17878881
NCBI-ProteinID:
XP_006282563
UniProt:
R0F2C7
LinkDB
All DBs
Position
Unknown
AA seq
792 aa
AA seq
DB search
MEDDGGERSSFIAGLIENRAKEVGMAAFDLRSASLHLSQYIETSSSYQNTKTLLRFYDPT
VIIVPPNKLAADGMVGVSELVDRCYSTVRKVVFARGCFDDTKGAVLIQNLAAEEPLALGL
DTYYKQHYLSLAAAAATIKWIEAEKGVIVTNHSLTVTFNGSFDHMNIDATSVENLEIIDP
FHNALLGTSNKKRSLFQMLKTTKTVGGTRLLRANLLQPLKDIETINTRLDCLDELMSNEQ
LFFGLSQVLRKFPKETDRVLCHFCFKPKKVTEAVLGFDNTRKSQNMISSIILLKTALDAL
PLLAKVLKDAKCFLLTNVYKSVCENDRYASIRKKIGEVIDDDVLHARVPFVARTQQCFAL
KAGIDGFLDIARRTFCDTSEAIHNLASKYREEFNLPNLKLPFNNRQGFFFRIPQKEVQGK
LPSKFTQVVKHGKNIHCSSLELASLNVRNKSAARECFIRTEICLEALMDAIREDISALTL
LAEVLCLLDMLVNSFAHTISTKPVDRYSRPELTDSGPLAIDAGRHPILESIHNDFVSNSI
FMSEATNMLVVMGPNMSGKSTYLQQVCLVVILAQIGCYVPARFATIRVVDRIFTRMGTMD
NLESNSSTFMTEMRETAFIMQNVSNRSLIVMDELGRATSSSDGLAMAWSCCEYLLSLKAY
TVFATHMDSLAELATIYPNVKVLHFYVDIRDNRLDFKFQLRDGTLHVPHYGLLLAEVAGL
PNTVIETARNITSKITDKENKRIELNCGKHQEIHRIYRVAQRLICLKYSRQTEESIRQTL
QNLRDSFIEQRL
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgacgggggagagagatcgagcttcatcgccggcctcattgagaacagagcc
aaagaggtcggaatggctgcatttgacctaaggtcggcttcactgcatctatctcagtac
atagagacgagcagctcatatcaaaacacgaagacgctgttgcgtttctatgatccaact
gtgataatcgttcctcccaacaaattagcagccgatggcatggttggtgtatctgaactg
gtggatagatgttatagcactgttaggaaggttgtttttgcccgtggctgttttgatgat
actaagggtgctgtattaatacaaaacctggctgcagaagaacctttggcgcttggttta
gacacttactacaagcagcattatctctcgttggctgctgctgcagctacaatcaaatgg
atagaggcggaaaagggagtgatagtcaccaatcactcactgactgtaacttttaatgga
tcgtttgatcacatgaacatcgatgcaaccagtgttgagaatctagaaatcattgatcca
ttccataatgcacttttgggaactagcaacaaaaagaggagtttgttccagatgctcaag
acaacaaaaacagttggcgggactaggcttcttcgtgccaatttgttgcagcctctgaaa
gatattgaaactattaacactcgcctggattgcctggatgagttgatgagcaatgaacaa
ctattctttgggctctcacaggttttacgtaaatttcctaaagagactgatcgagtactt
tgtcatttctgcttcaagcccaaaaaagtcacagaagcggtcctaggttttgataatacc
agaaagagccaaaacatgatttcaagcatcatcttacttaagactgcattggatgctttg
cctctacttgctaaggttttgaaggacgcaaagtgttttctccttaccaatgtttacaag
tctgtgtgtgaaaatgatagatatgcttccatcagaaaaaaaatcggggaagttattgat
gatgatgttctccatgcacgagttccttttgttgcccgcacacagcagtgttttgcttta
aaagccggaattgatggatttttggatattgcaaggagaaccttttgtgatactagtgaa
gcaatacataatctggccagtaagtatcgtgaggaattcaacttgccaaatttaaaactt
cctttcaacaacaggcaaggcttctttttcagaattccacagaaggaagttcagggaaaa
cttccaagcaaattcactcaggttgtaaaacatgggaaaaatattcattgttcgagtctg
gaactggcttctttgaatgtcaggaataagtctgccgctagagagtgtttcattcgaacg
gaaatatgcttggaagcactaatggatgcgataagggaagatatctctgccctcacgctc
ctagcagaagtcttatgtctcctagatatgcttgttaattcatttgctcatacaatatcc
acaaagccagtggatcgatactctagacctgaactaacagatagtggcccactggcaatt
gatgctggaaggcatcccatactagaaagcatacacaacgactttgtttctaatagtatc
ttcatgtcagaagcaaccaacatgttggtagtcatgggcccaaacatgagcggaaaaagc
acatatctccaacaggtgtgtctagtagtcattcttgctcagattggctgctatgtccca
gctcgctttgcaactataagggtagttgaccgcatatttacaagaatggggacaatggat
aaccttgagtcgaactcaagcacgtttatgacagagatgagagagaccgctttcataatg
cagaatgtctccaacaggagtttgatagtcatggatgaacttgggagggcaacttcttcc
tcagacgggttagccatggcatggagctgctgcgagtatctcttatcactcaaagcgtac
acagtatttgcaacccatatggacagtctcgctgagttagcaaccatctatccaaatgtc
aaggttcttcacttttatgtagacatcagagacaaccgcttagacttcaagtttcaactg
cgagatggaaccctacatgttccacactatggccttctattagccgaagtggctggtctg
cccaatacagtgatcgaaacagctaggaacataacctcaaaaatcactgacaaagaaaat
aaaagaattgagctaaactgtggaaagcaccaagagatacataggatctaccgagttgct
caaaggttgatatgcttgaaatactctagacagacagaagagtcgattcgtcaaactctc
caaaatctgagggacagtttcatagaacaaaggctctaa
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