Capsella rubella (pink shepherd's-purse): 17878955
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Entry
17878955 CDS
T02984
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 1 homolog
KO
K10683
BRCA1-associated RING domain protein 1
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
17878955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crb03019
]
17878955
04121 Ubiquitin system [BR:
crb04121
]
17878955
03036 Chromosome and associated proteins [BR:
crb03036
]
17878955
03400 DNA repair and recombination proteins [BR:
crb03400
]
17878955
Messenger RNA biogenesis [BR:
crb03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
17878955
Ubiquitin system [BR:
crb04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
17878955
Chromosome and associated proteins [BR:
crb03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
17878955
DNA repair and recombination proteins [BR:
crb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
17878955
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
BRCT_2
zf-C3HC4_2
zf-RING_2
zf-RING_UBOX
zf-HC5HC2H
zf-HC5HC2H_2
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_4
zf-RING_5
zf-RING_6
RTT107_BRCT_5
zf-RING_10
PTCB-BRCT
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
17878955
NCBI-ProteinID:
XP_006286293
UniProt:
R0FBN8
LinkDB
All DBs
Position
Unknown
AA seq
938 aa
AA seq
DB search
MADTSHLERMGRELKCPICLSLFNSAVSLSCNHVFCNECIVKSMKVDATCPVCKVPYHRR
EIRGAPHMDSLVSIYKNMEDASGVNIFVSQNNPSPLDKEKHVRDASTEKENDKNRQVSKK
GRATKRKECGKAKETDTDARGPIVMKPSSQTKKRVQLLQNLSSESLAKPTESTQSAENIK
GYTDKTVIRLDEHPCLNKEGNLSPFFWLRDEVDGESSSQRTLSDPLLDTTPVDVPSFSDL
MDSDHESPLKVDEQEKSNPGDMFDSEMFEWTQRPCSPEILPSPVKAKVPDRSEIDLNPKK
PSKVALSKCKTRKAGSERNTVVRRSGVSEDNIESSAIANISEKQDICGASGTTITNDGNP
DENVNAKRVTRSKGQSSRVQSDLNVSKAADVKQGSKRKRSGIKSSSAHPIAGSDELPLGT
EILGKGDQDQSHCSSDTHPEKQSPTKKPSLKKRGRMSTASSSKDLSGKTQKKTSEKRLKL
DSHLISSKVTQSHGNDILTDKLNQVGDKQDSTIKKKSSVDKDNHTMQVIEKCSARNKSTS
GGSAHLRRCDGPSTKKFTCAFCQSSEDTEASGEMAHYLRGEPVSADFDGGSKVIHVHKNC
AEWAPNVYFNNLTAVNLDVELTRSRRISCSCCGLKGAALGCYNKSCKNSFHVTCAKLIPE
CRWDNENFIMICPLETSIKLPCEETTKKERKRKCAPKGPLHSETNQVSRKTNIAEIQSKH
FHGFSLSKKLIISCSGLTVEEKTVIAEFAEISGVTIAKKWEPTVTHVIASIDENRACKRT
LKFMMAVLEGKWILTIDWIKACMKDTKHVSEEPYEITMDVHGIREGPYLGRQRALNKKPK
IFNGLKFYIMGDFELAYKGYLQDLIVAAGGTILRRRPVSNDNDEASTIVVFSVEPSKKKT
LTQRRSDAEALAKSARARSASSSWVLDSIAGCKILDLI
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atggcggacacaagtcacctggagaggatgggaagagaactcaagtgccctatttgcttg
agtctatttaattctgcagtttcactttcgtgcaaccatgtcttttgcaatgaatgtata
gtgaaatctatgaaagtggatgctacttgcccagtttgtaaagtcccttaccatcgtaga
gagattcgaggtgctcctcatatggatagcttggtgagcatttacaagaacatggaagat
gcttctggtgtcaacattttcgtcagccagaataatccttcaccattagataaagaaaag
catgtgagagatgcttccacagaaaaggaaaatgataagaatcgtcaggtttctaagaag
ggccgagcaaccaagaggaaagagtgtggaaaagccaaggaaacagatacagatgcacgg
ggacctattgttatgaaaccttcttcccaaaccaagaaaagggtgcagctgctgcagaat
ctctcttctgaaagcttagctaaacctactgagtctactcaatcagctgaaaatatcaag
ggttacactgacaaaaccgtgattcgtttggatgagcatccatgtctgaataaagaagga
aatctgtcacccttcttttggttgagagatgaagttgatggggagagctcaagtcagcgc
acactaagtgatccacttttagatactacacctgttgatgttccatctttcagcgatttg
atggactcagatcatgagagcccattgaaggttgatgagcaagaaaagtcaaatcctgga
gacatgtttgacagtgaaatgtttgaatggactcagaggccttgttctccggagattcta
cctagtcctgtgaaggcaaaggtcccagatagaagtgagattgatcttaatccaaagaaa
ccatctaaagtagcattatccaaatgtaaaacccgcaaagcaggaagtgaaagaaataca
gttgttagaagaagtggagtttcagaggataacatagaatcatctgcaatagcaaacatt
agtgagaaacaagatatttgtggggcttctggcactactatcacgaatgatgggaatcct
gatgaaaatgtgaacgctaaaagggttacaagaagcaaaggtcagagttcacgagttcag
tctgatctgaatgtatccaaggcagcagatgtgaagcaggggtcaaagaggaaaagatct
ggcattaaatcctcttcagctcatccaattgcaggatctgatgagctcccacttggaaca
gaaattttgggaaagggtgatcaggatcaatctcattgttcatctgatacacatcctgaa
aaacaaagtcccaccaagaaaccctctctgaagaagaggggaagaatgtccactgcaagc
tcttcaaaagatttatctggaaaaactcaaaagaagacttcagaaaagagattgaaactt
gattcccatttgatttcaagcaaagttacacaatcgcatggaaatgatatcctaactgat
aagttgaatcaagtaggtgataaacaagattcaacaatcaaaaagaaatccagtgtggat
aaagacaatcacaccatgcaagttatagagaaatgctcagcgagaaacaagtctacatct
ggaggtagtgcacatttgcgacgatgtgatggaccttcaacgaagaaattcacatgtgcc
ttttgtcagtcttccgaagacacagaggcttcaggagaaatggctcactacctccgaggt
gaacctgtctctgcagattttgatggtgggtctaaggtcatacatgttcacaaaaactgt
gctgaatgggctccaaatgtatacttcaacaaccttaccgcggtgaatcttgatgtggag
ttgacaagaagccgaagaattagttgcagctgctgtggacttaaaggcgcagcacttggt
tgttacaataagagttgcaagaatagttttcatgttacttgtgcaaaattgataccagaa
tgcagatgggacaatgaaaactttataatgatatgccctttggaaacatccattaagttg
ccctgtgaggagactactaaaaaagaaagaaaacgcaagtgtgctcctaaaggaccactg
cactctgagacgaaccaagtttctagaaaaacaaacatcgctgagatccagagcaaacac
ttccatggattttcattatccaagaaattgatcatatcctgctctgggctcacagtggaa
gagaagactgttattgcagaatttgcggaaatttctggagttacgatcgcaaaaaagtgg
gagccaactgttacacatgtcattgcatcaattgatgaaaacagagcctgcaaaaggacc
ctcaaattcatgatggcagttttggaggggaaatggatactaaccattgattggattaag
gcgtgtatgaaagatacaaaacatgtaagcgaggagccgtatgaaataaccatggatgtt
catggaatacgagaaggaccttatcttggaagacaaagagctttgaacaagaaaccaaaa
attttcaatggactaaagttttacattatgggagattttgagcttgcatacaaagggtat
cttcaagatctgattgtagcagcaggaggaacaatcctgcgcaggcggcctgtgtctaat
gacaatgatgaagcttcaacgatcgtagtgtttagtgttgagcctagcaagaagaaaact
ctaacccaaagaagatctgatgctgaagccttggcaaaatctgctagagccagatctgca
agcagttcatgggttttggattctattgcaggttgcaaaattttagacttaatataa
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