Capsella rubella (pink shepherd's-purse): 17879138
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Entry
17879138 CDS
T02984
Name
(RefSeq) DDB1- and CUL4-associated factor 13
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
crb
Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
crb03009
]
17879138
04121 Ubiquitin system [BR:
crb04121
]
17879138
Ribosome biogenesis [BR:
crb03009
]
Eukaryotic type
90S particles
Other 90S particles
17879138
Ubiquitin system [BR:
crb04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
17879138
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Sof1
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
WD40_RFWD3
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
eIF2A
Beta-prop_SCAP
PROPPIN
Beta-prop_Vps41
VID27
Motif
Other DBs
NCBI-GeneID:
17879138
NCBI-ProteinID:
XP_006283719
UniProt:
R0F4G8
LinkDB
All DBs
Position
Unknown
AA seq
452 aa
AA seq
DB search
MRIKTLSRSSDEFTRERSQDLQRVFHNFDPSLRPMEKAVEYQRALKAAKLEKIFARPFIG
AMDGHRDGVSCMAKNPNYLKGIFSASMDGDIRLWDISSRRTVCQFPGHQGAVRGLTASTD
GNVLVSCGTDCTVRLWNVPRPTLEDSSVSSENIIKPSAEYVWKNAFWAVDHQFEGDLFAT
AGAQLDIWNHNRAQPVQSFQWGTDSVISVRFNPGEPDILATSASDRSITIYDLRMSSAAR
RIIMMTKTNSIAWNPMEPMNLTAANEDGNCYSFDGRKLDEAKCVHKDHVSAVMDIDFSPT
GREFVTGSYDRSVRIFPYNGGHSREIYHTKRMQRVFCVKYSCDATYVISGSDDTNLRLWK
AKASEQLGVILPREQKKHEYNEAVKNRYKHLPEVKRIVRHRHLPKPIYKALGVIRAVNDS
KRRKEERRKAHSAPGTIVTKPLRQRRIIKEVE
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgaggattaagacgttatcgagatcgagtgatgaattcacccgagaaagaagtcaggat
cttcagagggtctttcacaacttcgacccaagtcttcgacccatggagaaggctgtggaa
taccagagagctcttaaagctgccaaattagaaaagatatttgcaaggccgtttatagga
gcaatggatggtcatcgtgatggagtctcgtgtatggcgaagaacccgaattacctcaag
ggaatcttctcagcttctatggatggagatattcgcctttgggatatctcttcaaggcgt
acagtttgccaattccctggtcatcaaggtgctgtgcgtggtcttacagcgtccactgat
ggcaatgtactggtttcatgtggaactgattgcactgttcgtttgtggaatgttcctcgt
cctacacttgaagattctagcgtttcatctgaaaatatcattaagccatctgcagaatat
gtctggaagaatgctttctgggctgttgatcatcagtttgaaggtgacctttttgctacg
gctggtgctcaactggatatatggaatcacaatagggctcagccagttcagagtttccag
tggggaacggactctgtaatatctgtccggtttaatcccggagagcctgatatattggct
acatctgctagtgaccgcagcataaccatatatgatctccgcatgtcttctgcagcaagg
agaatcatcatgatgacaaaaacaaattcaattgcatggaaccccatggagcctatgaac
ctgacagctgctaatgaagatggtaattgctatagctttgatggtagaaagttggacgaa
gccaagtgcgtgcataaagatcatgtttctgcagtgatggatattgatttttcaccaact
ggtcgtgaatttgttacgggttcttatgatcgatcggtgagaatcttcccatacaatgga
gggcacagcagggaaatttaccatacaaagaggatgcagagagtattctgtgtcaagtat
agctgtgatgctacatatgtaatatcaggcagtgatgataccaatctcaggctatggaag
gcaaaagcatcagaacaattgggagttattcttccaagggaacagaagaagcatgagtac
aatgaggctgtgaagaaccggtacaagcatcttcctgaggtcaagcgcattgtgagacac
aggcacttgccaaaaccaatatacaaagcattgggggtcatccgagctgtgaacgattca
aagagaagaaaagaagagcgaaggaaagctcacagtgcaccaggaacaattgtcacaaaa
cctctgcgccaaagaaggattatcaaggaagtggagtga
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