Capsella rubella (pink shepherd's-purse): 17879147
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Entry
17879147 CDS
T02984
Name
(RefSeq) biotin carboxylase, chloroplastic
KO
K01961
acetyl-CoA carboxylase, biotin carboxylase subunit [EC:
6.4.1.2
6.3.4.14
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb00061
Fatty acid biosynthesis
crb00620
Pyruvate metabolism
crb00640
Propanoate metabolism
crb01100
Metabolic pathways
crb01110
Biosynthesis of secondary metabolites
crb01200
Carbon metabolism
crb01212
Fatty acid metabolism
Module
crb_M00082
Fatty acid biosynthesis, initiation
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
17879147
00640 Propanoate metabolism
17879147
09103 Lipid metabolism
00061 Fatty acid biosynthesis
17879147
Enzymes [BR:
crb01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.14 biotin carboxylase
17879147
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.2 acetyl-CoA carboxylase
17879147
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
ATP-grasp
Dala_Dala_lig_C
ATP-grasp_5
ATP-grasp_LDMS
RimK
Motif
Other DBs
NCBI-GeneID:
17879147
NCBI-ProteinID:
XP_006286189
UniProt:
R0FAQ1
LinkDB
All DBs
Position
Unknown
AA seq
536 aa
AA seq
DB search
MDASMITTNFKSIASPPSLVLGKTGVIRSSLCNITMPQKVNFPRQRTQTLKVSQRKAKRA
TSGGALGATCSGGDKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADEAV
CIGEAPSNQSYLVIPNVLSAAISRGCTMLHPGYGFLSENALFVEMCRDHGINFIGPNPDS
IRVMGDKATARETMKNAGVPTVPGSDGLLKSTEEAIKVANEIGFPVMIKATAGGGGRGMR
LAKEPEEFVKLLQQAKSEAAAAFGNDGCYLEKYVQNPRHIEFQVLADKFGNVVHFGERDC
SIQRRNQKLLEEAPSPALTAELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEM
NTRIQVEHPVTEMIYSVDLIEEQIRVAMGEKLRYKQEEIVLRGHSIECRINAEDPFKGFR
PGPGRITSYLPSGGPFVRMDSHVYSDYVVPPSYDSLLGKLIVWAPTREKAIERMKRALDD
TIITGVPTTINYHKLILDVEDFKNGNVDTAFIVKHEEELAEPQEIVAVKDLTNAAA
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggacgcctctatgattaccaccaatttcaaatccattgcttctccaccctccttagtc
ctggggaagacaggagttatcagaagttctttatgtaacataacgatgccacaaaaggtt
aacttccccaggcaaagaacacaaactctaaaagttagccagaggaaagccaagagagct
actagtggtggtgctcttggtgctacatgcagtggtggtgataagattcttgtggctaat
cgaggtgaaatcgcagttcgtgttatccgaactgcgcacgaaatggggattccttgtgtt
gctgtttattcaactatagataaagatgccctccatgtcaaattggctgatgaagctgtt
tgtattggtgaagctcctagcaaccagtcgtacttggtaattccaaatgttctgtcagct
gctatcagtcgtggttgtacaatgcttcatcctggatatggttttctttcggagaacgct
ctctttgttgaaatgtgtagagaccatgggatcaattttattggacctaatcctgatagc
atccgtgttatgggagacaaagcaactgcaagagagacaatgaaaaatgcaggggttccc
actgtaccgggaagtgatgggctattgaagagcacagaagaagcaatcaaggtcgccaat
gagattggttttcctgtaatgatcaaggcaactgctggtggtggtggacgtggaatgcgt
cttgctaaagaaccggaagagtttgtaaaactgttacagcaagctaagagtgaggctgct
gctgcgttcggaaatgatggatgttatctggagaagtacgtacaaaaccctagacatatt
gagttccaggtgctggcagataaatttggaaatgttgttcactttggtgagcgtgactgc
agcatccagaggcgtaaccaaaagcttctggaagaagcaccttctccagcattgaccgct
gaattgcgaaaagctatgggtgatgcagcagttgctgcagcagcatccattgggtacatt
ggtgttggtactgtggagtttcttttagatgaaagaggttccttctacttcatggaaatg
aacactaggatccaggtggagcatcctgtaacagagatgatttactctgttgatttgata
gaggagcagattcgtgttgcaatgggagagaaacttcgttacaaacaggaagagattgtg
ctcagagggcactcaattgaatgtcgtatcaatgcagaagatccattcaaaggattcaga
cctggccctggcagaataacatcatacttgccatctggaggtcctttcgttagaatggat
agccatgtttattccgactatgttgtgcctccaagctatgattctcttctagggaagctt
attgtttgggctccaacaagggaaaaagcaatcgaacggatgaaacgtgctcttgatgac
actataattacaggggttccaacgaccatcaattaccacaaacttatccttgatgttgag
gatttcaaaaatggaaatgttgatactgctttcatcgtcaagcatgaagaggagctagct
gagcctcaagaaattgtggccgtgaaagatctgacaaacgcagcggcttag
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