Capsella rubella (pink shepherd's-purse): 17879301
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Entry
17879301 CDS
T02984
Name
(RefSeq) pre-mRNA splicing factor SR-like 1 isoform X2
KO
K12850
pre-mRNA-splicing factor 38B
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
17879301
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
crb03041
]
17879301
Spliceosome [BR:
crb03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
17879301
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
17879301
NCBI-ProteinID:
XP_006284038
UniProt:
R0F627
LinkDB
All DBs
Position
Unknown
AA seq
349 aa
AA seq
DB search
MGGNCRGPSSAYCLLYKFFTMKLTVKQMHGLLKHTDSPYIRAVGFLYLRYVADSKTLWTW
YEPYINDDEEFSPGSNGRMTTMGVYIRDLLLGLYYFDTLFPRIPVPVMRQIVSNLEKMNL
PTKPSGSTGDMSRGSEDTARRPPSVKASLSVSFGQRAPHRASTRGSSPVRRPPPSGYDRN
GGDELQQRSPRRSQSRDYYSDRDSDRQREKDRERDRERDRERERDRERDRERDRYRERER
DYGNDRRSRRDYESRSRRSDYDDDRSRHDRRSRSRSRSRSRSVQIEREPTPRRDSIINKE
KAVTVNSNLAKLKDLYGDATSSQKGDQGIGTRRDSSSEEVIKLGGSSWR
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgggtggaaactgccgtggtccttcatcagcttattgtcttctctacaaattctttacc
atgaaacttacagtgaagcagatgcatgggctgttgaagcacacagattctccttatatt
agagcggttggattcctttatttaagatatgttgcagattcaaagacgttgtggacatgg
tatgaaccatacattaacgacgatgaggagttttcaccaggatcaaatggacggatgacg
acaatgggtgtttatatacgtgatttgctgcttggactgtactactttgatacattgttt
cctcggatacctgtccctgtcatgcgccagattgtatcaaacctggagaagatgaatttg
ccaactaaaccttctggttcaacgggagacatgagtcgtggctctgaagacactgcccgt
cgtccaccatcagtaaaagcatctctttctgtttcatttggtcagcgtgcacctcaccgc
gcttccaccagagggtcttctcctgttcgccgtcctccaccgtctggttatgacagaaat
ggaggcgatgagctacaacagcggtccccacgtaggagccagagccgagactattattct
gacagagactcagatagacagcgggagaaagaccgcgaaagggacagagagagagacagg
gagagggagagagatagggaaagagatagggagagagatagatacagagaaagggagagg
gattatggtaatgataggagatcaaggcgtgactatgaaagtagaagtagacgcagtgat
tacgatgatgatagaagcagacatgaccggagaagcaggagcagaagccgaagtaggagc
aggagtgtgcaaatcgagcgtgaaccaactccaagaagagatagtatcatcaacaaggag
aaagctgtgactgtgaacagcaatcttgcaaagctaaaagatttatatggagacgctact
agtagtcaaaaaggtgatcaaggaattggaacaagaagggattcgagttcagaagaagtg
attaagcttggtggttcctcttggaggtga
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