Capsella rubella (pink shepherd's-purse): 17879376
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Entry
17879376 CDS
T02984
Name
(RefSeq) ARF guanine-nucleotide exchange factor GNL1
KO
K18443
golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
17879376
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crb04131
]
17879376
Membrane trafficking [BR:
crb04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
17879376
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec7
Sec7-like_HUS
TPR_28
Sec7-like_HDS
Motif
Other DBs
NCBI-GeneID:
17879376
NCBI-ProteinID:
XP_006282998
UniProt:
R0F3H1
LinkDB
All DBs
Position
Unknown
AA seq
1445 aa
AA seq
DB search
MGYQNHPSGSNSFHGEFKSCHSKPSKGAVASMINSEIGAVLAVMRRNVRWGVRYIADDDQ
LEHSLIHSLKELRKRIFSWQSNWQNVDPILYIRPFLDVILSDETGAPITGVALSSVYKIL
TLDIFTLETVNVGEAMHIIVDAVKSCRFEVTDPASEEVVLMKILQVLLACIKSKASSGLS
NQDICTIVNTCLRVVHQSSSKSELLQRIARHTMHELIRYIFSQLPSISPLAIENELHVDD
KVGTVDWDQNSGENKVGNGNIASISDTPGTENNSPSSETVIPETELKNDEKKTEVNDDLN
VPANGENAMMAPFGIPCMVEIFHFLCTLLNVGEHGEVNSRSNPIAFDEDVPLFALGLINS
AIELGGTSFREYPKLLTLIQDELFCNLMQFGVSMSPLILSTVCSIVLNLYLNLRTELKVQ
LEAFFSHVLLRIAQSKHGSSYQQQEVAMEALVDLCRQHTFMAEVFANFDCDITCSNVFED
VANLLSKSAFPVNGPLSAMHILALDGLISMVQGMAERVGEELPSSDVHTHEEGYEEFWTA
RCENYGDPNFWVPFVRKAKRIKKKLMLGADNFNRDPKKGLQYLQGMHLLPEELDPKSVAC
FFRYTCGLDMDLIGDYLGNHDQFCIQVLYEFAKTFDFQNMNLATALRLFVGTFRLPGESQ
KIQRVLEAFSERYYEQSPHILINKDAAFVLAYSIILLNTDQHHSQVKTRMTEEDFIRNNR
GINGGADLPREYLSEIYHSICNIEIQMNATKGTSFQMMTASRWISVIYKSKETSPYILCD
AASHLDRDMFCIVSGPTIAATSVVFEQAEQEDVFQRCVDGLLAIAKLSAYYHLNSVVDDV
VVSLCKFTPFSTPLSADEAVLALGEDARARMATEAVFLIANKYGDYISSAWKNILECVLS
LHKLQILPVHIASDAADDTEPSTSNLEQEKPSTNPLSVVSESQPSVTPRKTSSFIGRFLW
SFDMEETKPLPTEEEQVAYKHARGIVNDCHIDSIFSDSKFLQAESLQHLVNSLIKAAEKN
EASAVFCLELLIAVTLNNRDRILLIWQTVYEHISGIIQSTSTPCTLVEKAVFGVLKICQR
LLPYKENLTDELLKSLQLVLKLNANVADAYCERITQEVGRLVKANASHVRSHIGWRTIIS
LLSITARHPEASDAGFEALRFIMSEGAHLLPSNYILCLDAAWQFAGSRVNEIDRSISAID
LMSNSVFCLARWSQEAKNSVGEDDAMVKLSRDIGEMWLRLVHNLKRVCRDPRDQVRNHAI
LMTTRAIAGADGIMLPQPLWFQCFDSEVFPLLDETLADSILNSKKTFKKTVEETLVLATK
LMSKAFLQSLQDISQQPSFCKLWLGVLNRFETYMSTKFRGKRSEKIHELIPELLKNTLLV
MKTTGVLLPGDDIGSDSFWQLTWLHVKKISPSLQSEVFPEEELDQLQTRNAKPEDSQTSE
NDAGD
NT seq
4338 nt
NT seq
+upstream
nt +downstream
nt
atggggtatcaaaatcatccttcgggaagtaactcgttccatggagagttcaagagttgt
cactccaaaccgtccaagggtgctgtggcatccatgatcaattctgaaattggtgcagtt
ttggctgtgatgagaagaaacgtacggtggggtgtacgctatattgcagatgatgatcag
ttagagcattctctaatccattctttgaaagaattgcgtaagcggatattttcatggcaa
agcaattggcaaaatgttgacccaatattgtatatacggccctttttggatgttatattg
tccgatgaaactggggctccaatcacaggcgttgctttgtcatctgtatacaagatcttg
acccttgacatttttacccttgaaaccgtgaatgtgggagaggcaatgcatatcatagtt
gatgctgtaaagagctgtcgttttgaggtaactgatccagcctcagaggaagtagttctg
atgaaaatacttcaagttctgctggcttgcataaagagtaaggcctctagtggattaagt
aatcaagacatttgcactatcgtcaacacttgtttgcgtgttgttcatcaatcaagctcc
aaaagtgaattgttgcagcgtatagctcgccacacaatgcatgagttgattagatatatc
ttctctcaacttccttctatcagccccttggctattgaaaatgagttacatgttgacgat
aaggtgggaacagtggactgggatcagaattctggagaaaacaaagttggaaatggaaat
attgctagtatatctgatactcccggcactgaaaacaattctccaagttctgagacggtt
attccagaaacagaacttaaaaatgatgaaaagaaaactgaggtcaatgatgacttgaat
gttcctgcaaatggtgaaaatgcaatgatggcgccttttggtattccatgcatggtagag
attttccatttcttgtgtaccctattgaatgttggagaacacggtgaagtcaattccaga
tccaacccaatagcgtttgatgaagatgttcctcttttcgctctgggattaattaattct
gctatagaacttggagggacttctttccgagagtacccaaagctgttgactttgattcag
gatgagttattctgtaacttgatgcagtttggtgtgtccatgagccctctgattctttct
acagtttgcagcatcgttcttaatctctacctaaatcttcgtactgagcttaaggtacag
cttgaagctttcttttcacacgtacttctgaggattgcacagagcaaacatggctcttct
tatcagcaacaggaggttgctatggaggctctggttgatctttgtagacaacatactttc
atggctgaagtgtttgcaaatttcgattgtgatataacctgcagtaatgtgtttgaagat
gttgcaaacctgctatccaagagtgccttcccagttaatgggcctttatctgctatgcat
atacttgcattggatgggttaatttctatggttcagggaatggctgagagggtgggtgag
gaattgccctcttcagatgttcatacacatgaagaaggatatgaagaattctggacagcg
agatgtgagaattacggagatcctaatttttgggttccttttgtccgaaaggcaaagcgt
ataaagaaaaagctgatgcttggggctgataattttaaccgtgatcctaagaaaggctta
cagtatctccaagggatgcacttgttgcctgaggaacttgatccaaagagtgtggcatgt
ttcttcaggtatacatgtgggttagatatggatcttataggagattatctcggaaatcat
gaccaattctgtattcaggtgctgtatgagtttgccaagacattcgacttccagaacatg
aatcttgctactgccctgcgtctctttgtaggtacctttagattgcctggcgagtcacag
aagatacagagggtgctggaggcgttttctgagagatactatgaacagtcaccacatata
ctgattaataaagatgctgccttcgtgttagcttactcgattatattgctgaacactgat
cagcaccactcgcaggtgaagacaaggatgactgaagaagatttcatccgtaacaacagg
ggaataaatggaggtgcagaccttcctagagagtacctatctgagatttatcattcaatt
tgcaacattgagattcagatgaatgcaactaagggaaccagcttccaaatgatgacagcc
agtcgttggattagtgtgatttacaaatccaaagaaaccagtccctatatcctatgtgac
gctgcatcccatctggaccgtgacatgttttgtatcgtgtctggtcccactattgcagct
acatctgtggtttttgagcaagcagagcaagaagatgttttccagagatgtgttgatggg
ttattggccattgcaaaactttcagcatattatcatttgaatagtgttgtggatgatgtg
gtcgtgtctctctgcaaattcacacccttctccaccccattatctgctgatgaagctgtt
cttgctctaggagaagatgcgagagccagaatggctactgaagctgttttcttgattgca
aataaatatggtgactacatcagttcggcctggaaaaacatactggaatgtgtcttgagc
ctccataaactccagattttaccagttcatatagctagtgatgcagcggatgacacagag
ccgtcaactagtaacttggagcaagaaaaaccttcgacaaatcctctttcagtagtatca
gagtctcaaccctcagtgacgcctcgcaaaacatctagttttattggtcggttcctttgg
tcttttgatatggaggagacaaagccattaccaaccgaggaagaacaggtagcttataaa
catgctcgtgggatagtgaacgattgtcacattgatagtatattctcagacagcaagttt
ctccaagctgagtctctgcagcatcttgttaactctctcataaaagcagccgagaaaaat
gaagctagtgctgtcttttgcctggagcttctgattgcagtaactcttaacaaccgagac
agaatcctactgatttggcaaactgtttatgagcatatctcaggtataattcaatcaacg
tcaacaccatgcacacttgttgaaaaggctgtttttggtgtgttgaagatttgccagaga
ttattgccatacaaggaaaatctaacagatgaacttctgaaatcactccaactggttctc
aagcttaatgcaaatgtggctgatgcatactgtgaacgcattacacaagaagttggccgt
cttgtaaaagcgaatgcatctcatgttagatctcatattggttggcgaacgatcatatct
ctgctatcaatcacagctcggcatccagaagcttctgatgctggatttgaagccctccgg
tttataatgtcagaaggagcacacttgttaccctcaaactacattctctgtttggatgca
gcttggcagtttgctggatcccgagttaatgaaattgatcggtccatctcagcgattgac
ttaatgtcaaactctgttttttgtcttgcaagatggtctcaagaggcgaaaaactcggtt
ggagaagacgatgctatggtgaaactaagtcgagatattggagaaatgtggctcagactt
gtgcacaacctcaagagggtttgtcgtgatccacgcgaccaagtgagaaaccatgcaatt
ttaatgacgacccgagctatagccggtgcagacgggatcatgttaccacaacctctatgg
ttccaatgctttgattccgaagtcttcccattgctagacgaaacgctcgctgattcgatc
ctgaattcaaagaagactttcaagaaaacagtcgaagaaacgcttgttctcgccacaaaa
ctcatgtcaaaagcttttcttcaatctcttcaagatatctcacagcaaccatcgttctgt
aaactctggcttggtgtcttgaaccgtttcgagacttacatgtcaacgaaattccgagga
aaacgcagcgagaagatccatgaactcataccggaacttctcaagaacacattgctggtg
atgaagacaacaggagtcttattaccaggtgacgatatcggaagcgacagtttctggcaa
ctaacgtggcttcacgtcaagaagatatctccttctctgcaatctgaagttttcccagaa
gaggagcttgatcagcttcagacacgaaacgcaaagcctgaggattctcagacatcggaa
aatgacgccggagactga
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