Capsella rubella (pink shepherd's-purse): 17879549
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Entry
17879549 CDS
T02984
Name
(RefSeq) DDB1- and CUL4-associated factor 8 isoform X2
KO
K11804
DDB1- and CUL4-associated factor 8
Organism
crb
Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
crb04121
]
17879549
Ubiquitin system [BR:
crb04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
17879549
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
WDR55
EIF3I
Beta-prop_EIPR1
Beta-prop_SPT8
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_VPS8
Beta-prop_TEP1_C
Motif
Other DBs
NCBI-GeneID:
17879549
NCBI-ProteinID:
XP_006283477
UniProt:
R0GVP1
LinkDB
All DBs
Position
Unknown
AA seq
494 aa
AA seq
DB search
MGEMAKRARSNFNGLHHPVVDFWRREVGGISSRNFSNRFSASEDLVLRLEIYKKLEKHKG
CVNTVSFNAEGDVLISGSDDRRVILWDWQLGNVKLSFHSGHADNVFQAKFMPFSDDRTIV
TCAADGMVRRANILEGAKVETSFLGLHQGRAHKLCIEPGNPHIFYTCGEDGLVQRFDLRT
EAPTELFTCQSVDPKRDMDAIQLNAIAIDPRNSNLFVVGGMDEYARLYDIRRFQGDGLNG
FTRAADHFCPPHLIGNEDVGITGLAFSEQSEVLVSYNDEFIYLFTPDMGLGSNPIPASPI
SKSSVSKSESASSPKNEIEHTPLVYKGHKNCETVKGVNFFGPRSEYVVSGSDCGRIFIWR
KKSGELIRVMEADRHVVNCIEPHPHIPVLASSGIESDIKVWTSKAAERATLPENIEMRKR
KPRGWMYRVSSPQELLAQLFALQNRRSSSPEREGESSSATGRGLLDLILTFNDQSDDGNA
TDDEDGNSREDLFS
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgggtgagatggcgaagagggctcgatcaaactttaacggattacatcaccctgttgtt
gatttttggcgacgagaggtcggtggtatctcctcccgtaatttctccaatcgcttctcc
gcctccgaggatttggttttgcgtctagagatatacaagaagctagagaagcacaaaggg
tgtgtgaacaccgttagcttcaatgctgaaggagatgttctgatttcgggttctgatgat
cggcgtgtcattctttgggattggcaacttgggaacgttaagctttccttccattcagga
cacgctgataacgtatttcaagcaaagtttatgcctttctctgatgatcgaaccattgtt
acttgtgctgctgatggaatggttcgtcgtgctaacattcttgagggtgccaaagtggag
acgtctttcttaggattgcatcaaggaagagctcataagctatgtattgagccaggaaac
cctcatatattctacacatgtggtgaagatggattagtacaacgttttgacctgaggact
gaagcccctacagaacttttcacgtgccaatcagttgatcctaagagggacatggacgcc
atccagctaaacgcaattgcgattgacccgagaaattctaatctctttgttgttggggga
atggacgagtacgctcgtctttacgatatccgtagatttcagggtgatggtttaaacggt
tttacccgagctgcagatcacttttgccctccacatcttattggtaatgaagacgttgga
ataacgggtttggctttctcagagcagagtgaggttcttgtttcatacaatgatgaattc
atatatcttttcacacccgatatgggattaggttccaaccctataccagcatccccgata
tccaaaagtagtgtatcgaaatctgaatcagcttcttcccctaaaaatgagattgaacac
actcctttggtttacaaggggcacaagaactgtgagactgttaagggtgtgaattttttt
ggccctcggtctgaatatgtggttagtgggtcagactgtgggcggatatttatttggagg
aaaaaaagtggggagcttatccgtgttatggaagcagataggcatgtagttaactgtatt
gagcctcatcctcacattcctgtgcttgctagcagcggaattgaaagtgacatcaaggtg
tggacgtcaaaggcagctgaaagagctacattacctgaaaacattgaaatgcggaagcga
aagcctaggggatggatgtaccgtgtatcttcaccgcaggaactactggcgcaactcttc
gcactgcagaacagaaggagtagtagtccagagagagaaggagaatcatcttcagccact
ggaagaggacttcttgatcttatcctcaccttcaatgatcagagcgacgatgggaatgca
acagatgatgaagatggtaatagccgtgaggacttgttctcttaa
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