Capsella rubella (pink shepherd's-purse): 17879590
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Entry
17879590 CDS
T02984
Name
(RefSeq) cyclic nucleotide-gated ion channel 17
KO
K27629
cyclic nucleotide gated channel 17
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb04075
Plant hormone signal transduction
crb04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
17879590
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
17879590
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
crb04040
]
17879590
Ion channels [BR:
crb04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
17879590
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
IQ
Motif
Other DBs
NCBI-GeneID:
17879590
NCBI-ProteinID:
XP_006286203
UniProt:
R0FBH0
LinkDB
All DBs
Position
Unknown
AA seq
724 aa
AA seq
DB search
MELRKDKLLMFYSEGKESKEAMWSVNDPMSKSYKLSLPSALRPDNLLPGNRLRYTDASKV
SSNKFKSSKVSWYKTILDPGSEIVLKWNWVFIVSCMVALFIDPLYFFVPAIGGDKNYPCA
RTDTSLSILVTFCRTIADLFYLLHIFIKFRTGFIAPNSSTRVFGRGELVMDPKAIAWRYL
KSDFIIDLIATLPLPQIVIWFVISTTKSYRFDHNNNAIALIVLLQYIPRFYLIIPLSSQI
VKATGVVTKTAWAGAAYNLLLYMLASHVLGAAWYILSVDRYTSCWKSRCNMENGLGSCQL
YYLDCDSMYDDQQMNWANVTKVFKLCDARNGEFEYGIFGNAITKKVVSSNFFERYFYCLW
WGLQQLSSYGQNLSTTMFMGETTFAVLIAIFGLVLFAHLIGNMQTYLQSLTVRLEEWRLK
KRDTEEWMRHRQLPEELRKRVRGYEQYKWLATRGVDEEVLLQSLPTDLRRDIQRHLCLDL
VRRVPFFSQMDDQLLDAICERLVSSLCTEGTYLVREGDMISEMLFIIRGRLESSTTNGGR
TGFFNSIILRPGDFCGEELLSWALLPKSTLNLPSSTRTVRTLVEVEAFALRAEDLKFVAN
QFRRLHSKKLQHTFRFYSHHWRTWAACFIQAAWRRYKRRVMENNLTVIESMENEEGEEVD
EEEKEEEEFVEQSPRTKMNIGVMVLASRFAANTRRGVAAQRVKDVELPRFKKPEEPDFSA
EPDD
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggagttaagaaaggacaagcttcttatgttttattcagaggggaaagaaagcaaagaa
gctatgtggtcagtgaatgatccaatgagcaaatcttacaagctctctttgccatctgca
ctaaggcctgataatctcttacctggaaatagacttagatacactgatgcttctaaagtt
agcagcaacaagttcaaatcttccaaagtctcatggtacaagacgattcttgatccagga
agtgagattgtcttgaaatggaattgggtgtttattgtctcgtgtatggttgctctcttc
atcgatccgttatatttcttcgtgccagccattggaggagataaaaattatccctgtgca
aggactgatacgagtctaagcatccttgttaccttctgcaggacaattgcggatcttttc
tacttgctgcacatttttattaagtttaggaccggtttcattgcgcccaattcaagtact
agagtgtttggtagaggtgagcttgtgatggatcccaaggcaattgcttggaggtatctc
aagtctgacttcatcattgatctcatcgcgactttaccacttcctcagatagttatctgg
tttgttatatcaaccacgaaaagttaccggtttgatcataacaacaatgccattgctttg
attgtgctcctccaatacatccctagattctatcttataattccgttaagttctcaaatc
gtgaaagcgactggagtggtgacaaagactgcttgggctggagctgcttataatcttttg
ctatacatgctagctagtcatgtgctaggtgcagcatggtatatattatcagttgataga
tatacatcatgctggaaatcaagatgcaacatggaaaatggcctaggcagctgtcagctg
tattacttggactgtgattcaatgtatgacgaccaacagatgaattgggcaaatgtcaca
aaagtatttaaactctgtgatgcacgtaatggcgagttcgagtatgggatattcgggaac
gcaatcacaaaaaaagttgtgtcttcaaacttttttgagagatatttctactgtttgtgg
tggggattgcaacagctaagttcttatggacagaatttgtccacgaccatgttcatgggc
gaaaccacatttgctgttctcattgcaatctttggtcttgtcctctttgcccatctcatt
gggaatatgcagacatatctgcaatctttgaccgtacggcttgaggaatggaggttgaag
aagagagacacagaggaatggatgagacatcgtcaacttcctgaagaattgagaaaacgt
gttaggggatatgagcagtataagtggcttgcaacaaggggagttgatgaagaggttctc
ctgcaaagtttacccactgatcttcgccgtgatattcaacgccacctatgtttagatctt
gttcgaagagtcccatttttctctcaaatggatgatcagttgcttgatgcgatatgtgag
cgcctggtttcttctctatgtaccgaagggacttaccttgtgcgtgaaggggacatgatt
tcagagatgctcttcatcatcagaggtagactcgagagttccacgaccaatggaggcaga
acgggtttcttcaactcgataatactaagacctggagatttctgtggggaagagcttctt
tcttgggctttgcttccaaaatcaaccttgaatttaccgtcttcgacaagaacagttagg
actttagttgaagtcgaagcattcgctcttcgagccgaagatttgaagtttgttgcaaat
cagtttagacggttacacagcaagaagcttcaacatactttcagattctactctcaccat
tggaggacttgggctgcttgcttcatacaagccgcttggcgcaggtacaagagaagagtt
atggaaaataatctcactgtgattgaatcaatggaaaacgaagaaggagaagaagtagat
gaagaagaaaaagaagaagaagagtttgttgagcagagtcctagaacaaagatgaacatt
ggagttatggttttggcttcccgttttgcagctaatacaagacgtggtgttgcagctcag
agagttaaggatgtcgaattgcctcggtttaagaaacccgaagagcctgatttctcggct
gagccagatgattga
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