Capsella rubella (pink shepherd's-purse): 17879609
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Entry
17879609 CDS
T02984
Name
(RefSeq) RRP12-like protein isoform X1
KO
K14794
ribosomal RNA-processing protein 12
Organism
crb
Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
crb03009
]
17879609
Ribosome biogenesis [BR:
crb03009
]
Eukaryotic type
90S particles
Other 90S particles
17879609
Pre-60S particles
Other pre-60S particles
17879609
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP12_HEAT
Adaptin_N
HEAT_2
UNC45-central
Cnd1
RIX1
NUP160_helical_2
Motif
Other DBs
NCBI-GeneID:
17879609
NCBI-ProteinID:
XP_023634535
LinkDB
All DBs
Position
Unknown
AA seq
1126 aa
AA seq
DB search
MAAFEDRADENDEIAFKDGNTDISQQLMDRYGKSSAAQHRHLVATAVAMRSILTSESLPP
SPSAFFAAAISSVDSSTEDPEAISALLTFLSIVVPLVPSGEISATMARDAVAVLVNSVDG
EGNKLGVASLRAGVKCIGALLIGFCDLDDWESLQTGFGLLLKFAIDKRPKVRRCAQECLE
KLFGSLRSSTVLKEASNSVYALLEEYMPVLSDLSSKKIEEGSKVNLTLKAENVEAAHALN
VLSATIPFLTAKVSSRVFTELCKLMGSQFSPLTRQILKAIDTIFKNSEDTVVVPEIEGLV
TSLTSYLSLHDKNPADTIVHVTTLLKSALEKAYSVEPTLCLRKLPLVCRSLAGLLTSTDD
VASQASVILKDLISSHIDKNKLLIDESLSGEDVDNVTSGEDINAARCVCSVFQTALNSCD
GNPKDHILTVINLLIEKLGELSYILAKDIILKLADLMKHATGDTSSSQYLQQCIGSAVVA
VGPVRLLTLLPITLHTESHSCTNAWLIPILREYIVGASLEYYVDHIVPLAKSLLLASKGA
KKSSHGKKLRAYSHELLRLLPAFCNYPVDVPQKFGSLAKLMVKFVKNKSFMHEAVALSIQ
MLVNQNKGMPKPSTDMGEAKAISEDATTELKSGFHYSKKSSAKNMKALASSSTQLLQTLV
DVLTVSGTEISADFKAAIGSLASTLNSSVRKRILISLLNKFDPAGESETEEKVNQSNDSI
EEEKETCGATKTQLKRSAVLDLASSFVEGAKEDLIELIYNLVRQSFQATDEADLCGAYDT
LSRVLQEHGWFCSSHFVEVIEMLLSHKNPEDAASSRSRFACLHVLMAHGIQSSTEEENEK
AFLILNEVILTLKDGKEEHRKSACDALVMVYTTLKNLSSISSEELCPKLINMITGYISGS
SPHIRSGAVSALSALIYKDPEICMSSPELLSSVLSLLHTKSIEIIKAVLGFVKVLVSTSQ
AQDLQNLLQNLLYEILPWSSVSRHYFKTKVTIIVEIMVRKCGTRAVQLATPDKHKSFIQT
VLENRSGKSKDKEETNDSQATSREKQKRNYRDASSETTAKQDGNKFKRQKRTHQQHTPAS
DISGSRTGPQRPGNRSFGKHREASGNNYKSGKETRKPQKNRFRKAP
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctttgaagacagagctgatgaaaacgatgaaattgccttcaaagatggcaac
actgatatttcccaacagcttatggaccgttacggcaagtcctcagccgcgcaacaccgt
catctcgtcgccaccgccgtcgctatgcgctctattctcacctctgagtcacttccgcca
tctccttcagctttcttcgcagctgctatatcctctgtggattcttctacggaggatccc
gaggcaatttctgctttgcttacattcctgtccattgtcgttcctttggttccttcagga
gaaatttcagctactatggctcgagatgctgtagctgttttggtaaattcagttgatgga
gaaggaaataaattaggtgttgcgagtttgagagctggtgtgaagtgcattggagccttg
cttattggtttctgtgatttggatgattgggaatcacttcaaactgggtttggtttactt
ctcaaattcgccattgacaaacgtcccaaggttagaaggtgcgctcaagagtgtttggag
aagttatttggttctctccgatcatctactgttctaaaggaagcaagtaattcagtttat
gctttacttgaagaatatatgcctgttctatctgacttaagctcaaaaaagattgaggaa
ggttctaaggttaacttaacattgaaagccgagaacgtagaggctgcccatgcgctaaat
gtgctgagtgctacaattccgtttctcactgcgaaagttagttctagagtttttacagaa
ctttgcaagcttatgggatcacagttttcgccgctgactaggcaaattctcaaagcaatt
gacactattttcaagaattcagaagatacagttgttgttcctgagatagaaggactcgta
acttctttgactagttatttatctttacacgacaagaatcctgctgacacgatcgttcat
gtgaccaccctattaaaaagtgctttggagaaagcctactcagtcgaaccgacattatgt
ctaaggaaacttccactagtttgtaggtcattggcaggccttctgacttccacggacgat
gttgcatcccaagcctcagttatattaaaagacttgatcagtagccacatcgataaaaat
aaacttctgatcgatgaaagcttgtctggtgaagatgtggataacgtaaccagtggagaa
gatataaatgcagcaagatgtgtatgctctgtctttcagactgccctgaactcatgtgat
ggaaatccaaaggatcacattttaactgtcataaatcttttgatcgagaaacttggagag
ctctcatatattcttgcaaaggatatcatattaaagcttgccgacttgatgaaacatgca
actggagacacttctagctcacaatatcttcagcaatgcattgggtctgcagtggttgca
gtgggaccagtaaggctactgacacttcttccaatcactcttcatactgagagtcactca
tgcacaaatgcttggctaattccaatcttaagagaatatattgttggagcatctcttgag
tattatgtcgaccacattgttccgcttgcaaaatcactgttgcttgcttctaaaggagct
aaaaagtcatctcacggcaaaaagttgcgggcctatagtcatgaacttctgagactgcta
cctgccttttgtaactatccagttgatgtcccccaaaaatttggatcgttagccaaacta
atggttaaatttgttaaaaataaatctttcatgcatgaagccgtcgctctttctatacag
atgcttgtaaatcagaataaaggaatgcctaagcccagtacagatatgggagaagcaaaa
gccataagtgaagatgcaacaacagagctgaaaagtggattccactattcaaagaaatct
tcagctaaaaacatgaaggctttggcatcaagctcgacacagttgcttcagactcttgtt
gatgtactcactgtttcaggcacagagatcagtgcagactttaaggctgcaattggatcc
ttagcttccactcttaattcatcagttaggaaaaggattctaatttctttgctaaataag
tttgatcctgctggtgaaagcgagactgaagagaaggtcaatcaatcaaatgattcaatc
gaagaagaaaaagaaacctgcggtgccacaaagacacagttaaagaggagtgctgtgctg
gatcttgcatcttcatttgttgaaggagccaaggaagatcttattgagttgatttataat
cttgttcgtcaaagttttcaggccaccgatgaggctgatctttgtggtgcatatgatact
ctgagcagagttcttcaggaacacggttggttttgttcatctcattttgtagaggtgata
gagatgttactcagccataaaaatccagaggatgcagcatcttctagaagccgatttgca
tgtctccacgttctaatggctcatggaattcagtcaagcaccgaggaggagaatgagaag
gctttcctaattctgaacgaagtgatcctgacacttaaagatgggaaagaagaacataga
aaatcagcatgtgatgcactggttatggtatataccaccctgaaaaatttatcatctatc
agcagcgaggaactttgtcccaaattgattaacatgataacgggttatatttctggatcg
tcgccgcacataaggagtggagctgtgtctgcactatctgctttgatatacaaagaccct
gagatctgcatgtcgtcacccgagcttctttcatctgttttatcgttgcttcacaccaaa
tccattgagattataaaagctgttttgggttttgtgaaagttttagtttcaacatcgcaa
gcccaggacttgcagaatcttctgcagaacctcttatacgaaattctcccctggtcgtct
gtttcaagacactattttaagacaaaggtaacgatcattgttgagattatggtaaggaag
tgtggcacccgcgcagtccaattagccacaccagacaagcacaagagtttcatccagaca
gttttagagaaccgttcggggaaatcaaaagacaaagaagagaccaatgattcacaggct
acatccagagagaaacagaaaagaaattacagagacgcttcatcagaaactacagccaaa
caagacggcaacaaattcaaacggcagaagagaacacatcaacaacacacacctgcttcc
gacattagtggaagtaggacaggaccacagcgccctggtaatagaagcttcggaaaacat
agggaggcttctggaaacaattacaagtcagggaaagagacacgaaagccacagaagaac
agattcaggaaagcaccatga
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integrated database retrieval system
