Capsella rubella (pink shepherd's-purse): 17879739
Help
Entry
17879739 CDS
T02984
Name
(RefSeq) protein transport protein SEC23 isoform X1
KO
K14006
protein transport protein SEC23
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
17879739
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crb04131
]
17879739
Membrane trafficking [BR:
crb04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
17879739
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
Gelsolin
zf-Sec23_Sec24
HVO_0758
Motif
Other DBs
NCBI-GeneID:
17879739
NCBI-ProteinID:
XP_006283156
UniProt:
R0GGZ4
LinkDB
All DBs
Position
Unknown
AA seq
781 aa
AA seq
DB search
MADMAYVDPEGMDGVRMTWNFWPRTKVEASKCVIPLAASISPIRRHPDILNLDYAPLQCR
TCSAVLNCFARVDFIAKIWICPFCYQRNTFPTHYHSISETNLPGELYQHYTTVEYTIPPS
LAGVGGQFDPRTGAPVPPQVPPPVFVFVLDTCMIEEELGYAKSALKQAIGLLPENALVGF
VSFGTQAHVHELGFSEMSKVFVFKGNKEVSKEQILDQLGLGSSSRRAPTSGFPKGAQNGF
QSSGVNRFLLPASECEYTLDLLLDELQTDQWPVQPGHRPQRCTGVALSVAAGLLGACLPG
TGARIVALVGGPCTEGPGTIVSKDLSDPVRSHKDLDKDAAPYYKKAIKFYDSIAKQLVAQ
GHVLDLFASALDQVGVAEMKVAVESTGGLVVLSESFGHSVFKDSFKRVFEDGEHSLGLCF
NGTLEINCSKDIKIQGIIGPCSSLEKKGPNVADTVIGEGNTSAWKLCGLDKSTCLTVFFD
LSSTGSNAPGAVNPQLYLQFVTSYQSPKGQNLLRVTTVSRRWVDTAVSTEELVQGFDQET
AAVVMARLTSLKMETEEGFDATRWLDRTLIRLCSKFGEYRKDDPTSFTLNTYFSLFPQFM
FNLRRSQFVQVFNNSPDETAYFRMLLNRENISNATVMIQPSLTSYTFNAPPQPALLDVAS
IAADRILLLDAYFSVVVFHGMTIAQWRTMGYHDQPEHEAFAQLLQAPQEDSQMLVQERFP
APRLVVCDQHGSQARFLLAKLNPSATYNNANEMSAGSDIIFTDDVSLQVFFEHLSKLAVQ
S
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggcggatatggcgtacgtggatccagaaggtatggatggagttcgtatgacttggaat
ttttggcctcgcactaaggttgaagctagcaagtgcgtgattccactagccgcttcaatt
tctccgatccgtcgtcatcccgatatccttaatctcgattatgctcctctccaatgccgt
acctgtagcgctgttctcaactgcttcgctcgtgttgatttcatcgccaagatctggatc
tgccctttttgttaccagaggaatactttcccgactcattaccatagtatctctgagact
aatctccctggtgagctttatcaacactacactactgttgaatacacgataccgccgtct
cttgctggtgttggtggtcaattcgatccgagaactggtgctcctgttccccctcaggtg
cctccgcctgtgtttgtgtttgttcttgatacgtgtatgatcgaggaagagttgggatat
gccaaatctgcgcttaagcaggcgatcgggttgcttccggagaatgctttggtggggttt
gtgtcgtttggtactcaggctcatgtacatgaattggggttctctgagatgtctaaagtt
tttgtctttaaaggcaacaaagaggtttccaaggaacaaattttggatcagttggggctt
gggtcttcctcgaggagagctcccacttctgggtttcccaaaggagcgcaaaacggattc
cagagttctggagttaacagattcctgctgccggcttcggagtgtgaatacacactggac
ttgcttttggatgagctccaaacagaccagtggcctgttcagccaggtcatcgtccccaa
agatgcacaggtgtggcattgagtgtagctgcaggattgcttggagcttgcttgcctgga
actggggctagaattgtagctttggttggaggtccatgtacagagggccctggaacgatt
gtctcaaaggatttgtcagatcctgtgcgctcccacaaagatctagataaagatgctgct
ccttattataaaaaagcaatcaagttttatgatagtattgcaaagcagctggtcgctcag
ggtcatgtgttagaccttttcgcttctgcacttgatcaggttggggttgctgaaatgaaa
gttgcagttgaaagtaccggtggtcttgttgttctatctgaaagttttggccattctgta
tttaaagattccttcaagcgggtgtttgaagatggcgagcactctcttggtctctgcttc
aatggcacgctggagatcaattgttccaaagacatcaaaattcaaggaataattggacct
tgctcttcattagaaaagaaaggtcccaatgttgctgacacagtcattggagaggggaat
accagtgcttggaagttgtgtggccttgataagagtacctgcttgactgtattctttgat
ctatcttcaaccgggtcaaatgctcctggagctgtaaatcctcagttgtatttgcagttt
gtcacaagttaccaaagccccaaaggtcaaaatttactccgggttacaactgtatccaga
cggtgggtagatactgctgtgagtacagaggaacttgtgcaaggctttgatcaagaaact
gctgctgtggttatggcaagattaacttccttaaaaatggaaacagaggagggatttgat
gctactcgatggctagatcggactctcattcgtctctgttcaaaatttggtgaatataga
aaggatgatccaacctcgttcacgctgaatacgtatttttcattgttccctcagttcatg
ttcaacctgcgacggtcgcagtttgttcaggtctttaacaatagtcctgatgaaactgca
tacttccgtatgttgctaaaccgggagaatatatcaaatgcaactgtcatgatccaacca
tcactgacgtcatatacatttaatgcaccacctcagccagctttgctggatgtggcttcc
attgcagccgacagaattcttctattagatgcatattttagtgttgttgtcttccatgga
atgactatagcacaatggcgaaccatgggttatcatgatcagcctgaacacgaggccttt
gctcagttattgcaagctcctcaagaggattcccagatgttagtacaggagcgtttccca
gccccaagattagttgtgtgtgatcaacatgggtcgcaggcaaggtttttattggctaag
ctgaatccatcagcgacttacaacaatgcaaacgagatgtcagctgggtcagacataatc
tttactgatgatgtgagcctgcaagtcttttttgagcatctttcgaaactggccgtgcaa
tcctga
DBGET
integrated database retrieval system
