Capsella rubella (pink shepherd's-purse): 17879794
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Entry
17879794 CDS
T02984
Name
(RefSeq) heparanase-like protein 3
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb00531
Glycosaminoglycan degradation
crb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
17879794
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
crb00536
]
17879794
Enzymes [BR:
crb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
17879794
Glycosaminoglycan binding proteins [BR:
crb00536
]
Heparan sulfate / Heparin
Enzymes
17879794
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_79n
Gly-zipper_C13G5-2
Motif
Other DBs
NCBI-GeneID:
17879794
NCBI-ProteinID:
XP_006283483
UniProt:
R0F4Q0
LinkDB
All DBs
Position
Unknown
AA seq
544 aa
AA seq
DB search
MREKCCRQIWFFKVLFFLCCVLQFLDYTVSSAVEEDNTGKVFVYGRAAVGTIDEDFICAT
LDWWPPEKCDYGTCSWDHASILNLDLNNIIFQNAIKAFAPLKIRIGGTLQDLVIYETPDQ
KQPCVPFTQNSSIIFGYTQGCLPMHRWGELNAFFSKTGAKIIFGLNALSGRSINPKGEAV
GAWDSTNAESFIRYTAQSNYTVDGWELGNELCGGGVGTRVAANQYAIDTINLRNVVNRVY
KNVSPMPLVIGPGGFFEDAWFSEYLKKAGNSLNATTHHIYDLGPGVDEHLIEKILNPSYL
DQEANTFRSLKNVIKKSSTKAVSWVGESGGAYNSGRNLVSNAFVYSFWYLDQLGMASVYD
TKTYCRQSLIGGNYGLLNTTNFTPNPDYYSALIWRKLMGRKALFTSFSGTKKIRSYAHCA
RQSKGITVLLMNLDNTTTVLAKVELNNTFSLRHTKHVKSYKRATSQLSWDSDGEVQREEY
HLTAKDGNLHSQTMLLNGNALQVNSMGDIPPIEPIHINSTEPITIAPYSIVFVHMPSVVV
PACA
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgagagaaaagtgttgtcgtcaaatctggttcttcaaggttttgttcttcctttgttgt
gtgcttcagttcttggactacactgttagctccgccgtggaagaagataataccgggaaa
gtgtttgtctacggaagagccgccgttggaactatagacgaagacttcatttgcgccacc
ttagactggtggccaccggaaaaatgtgactacggcacttgtagttgggaccatgcttcc
attctcaatctggatttgaacaacattatttttcagaatgcaattaaagcatttgctcca
ttgaaaataagaataggaggaacattacaagacttggtgatatatgagacaccagatcag
aagcaaccttgtgttccttttacccaaaactcttcaattatctttggttacacacaagga
tgtcttcctatgcatagatggggagagcttaatgctttctttagtaaaactggagctaaa
atcatctttggactgaatgcactctccgggcgttcgataaatcctaaaggtgaagccgta
ggagcctgggattcgactaatgctgaatcgtttatacggtatacagcacagagtaactac
accgtcgacggttgggagctcggcaatgagctgtgtggaggtggtgttggtacacgagtt
gcggcgaatcagtatgctatagataccataaatctaaggaatgttgtgaaccgggtttac
aagaatgtgagtcccatgccgttggtgataggtccgggtggcttctttgaagatgcttgg
ttctccgaatacctgaaaaaagcaggaaactctctcaatgcaaccactcaccacatctac
gacctcggtccaggtgtagatgaacatctgatagaaaagattctaaacccttcgtatctg
gaccaagaggcaaacacgttccgcagcctcaagaacgtaatcaaaaagtcctcaactaag
gccgtgtcatgggttggtgagtctggtggtgcttacaacagcgggcggaatcttgtctct
aatgctttcgtgtatagtttctggtacttggaccagcttggtatggcatcagtgtatgat
accaaaacatattgtagacagtctctgatcggaggaaactacgggctgctaaatactact
aatttcacacccaatccagactattacagtgctctgatctggcgaaaacttatgggaaga
aaggcattgttcacaagcttttccggaaccaaaaagatacgttcatacgcccattgtgca
agacaatctaaagggatcacagttttactgatgaaccttgacaacactacaacggtttta
gcgaaagtagagctaaataacactttcagtctgagacatacaaagcatgtgaagtcttat
aaaagagcaacttcccaactttcttgggatagcgatggcgaagtccaaagagaagagtat
catttgacagcaaaggatggaaacttacacagtcagactatgctactcaatggaaatgct
cttcaggttaattcaatgggtgacatacctccaatagagccgatacatataaattcaaca
gagccgataacaatagctccatattccattgtgtttgtgcatatgccgagtgttgttgta
cctgcatgtgcttag
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