Capsella rubella (pink shepherd's-purse): 17879994
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Entry
17879994 CDS
T02984
Name
(RefSeq) uncharacterized protein LOC17879994
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
17879994
Enzymes [BR:
crb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
17879994
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Paralog
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
RhgB_N
Y_Y_Y
Motif
Other DBs
NCBI-GeneID:
17879994
NCBI-ProteinID:
XP_006285725
UniProt:
R0H516
LinkDB
All DBs
Position
Unknown
AA seq
681 aa
AA seq
DB search
MEYGAPVMKAVRVMTKLFVLIFLLQSVHSRSSRVKLNIVDERGQKFASPPVTLKKVGPNQ
VVVDNGIIQVTFSCPRGLITGIKYNGFNNILNDQIENRGYWDVVWYELGHQPETDLLVGT
KFDIVNQTSEHVEISFSRTWSVSQRGSVAPLNVDKRYIIRRGVSGVYMYAVLERLKGWPD
VLMDQTRIVFKLNTTKFDVMAISDDRQKIMPFEADRNIRSGRASKLAYKEAVHLKNPQNH
MLKGQVDDKYMYSMEDKDNKVHGWISSDQGVGFWMITPSNEFRGCGPVKQDLTSHLGPTT
LSMFTSVHYVGKDMNTSYTSKEPWKKVFGPVFVYLNSASSRNLLWTDAKRQMVSEVQSWP
YDFVKSVDYPLYHQRGTIKGQLFVKDRYNKIKANLFEEYAFVGLALPGEAGSWQTENKGY
QFWTRADKTGMFTIANVRPGTYSLYAWVPGFIGDYKYERDITITPGKEINIGPIVYEPPR
NGQTLWEIGEPDRTAAEFYIPEPDPALFTKLSFNHSNPQDRFRQYGLWDRYSALYPRNDL
VFIAGLSDYKKDWFYAHVNRKAGNGTYEATTWQIKFNLKAVTQTGNYTLRIALAAATTVN
LMVQVNEADSKPIFMSGLIGRDNAIARHGIHGLYKLYNIDVNGKLLRVGNNTIFLTHGRN
TTDSFSGVMYDYLRLEGPSGV
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggaatacggagctccggtaatgaaggcggttcgggttatgaccaaactgttcgttctg
atctttcttcttcaaagtgttcattctcgatcatcacgagtcaaattaaacatagttgat
gaacgcggacaaaaatttgcatctcccccggttacgctcaagaaagttggtcctaaccaa
gtggtcgttgataacggtataatccaagttaccttctcatgtccacgaggcttgataact
ggaatcaagtacaatggctttaacaatatcttgaacgaccaaattgaaaatcgcgggtat
tgggacgtagtatggtatgaactaggacatcaaccggaaaccgatttgttagtaggaaca
aaattcgatattgtaaatcaaacaagtgagcatgtggaaatttcattttcgagaacatgg
agtgtgtctcaacggggctcagtagcgccgttgaacgtagacaaacggtatattattcga
aggggtgtgtccggagtatacatgtacgctgtgttggagaggttgaaaggttggcctgat
gtactcatggaccaaaccagaatcgtcttcaagcttaacacaacaaaattcgatgtaatg
gctatatcggatgatcggcagaaaattatgccttttgaagcagatagaaatatcaggagt
ggtcgtgctagtaaactggcttacaaagaagctgttcatttgaaaaatccacaaaatcat
atgcttaaagggcaggtagacgataagtacatgtactcaatggaagacaaagacaacaaa
gtacacggttggatatcgtcggaccaaggtgttgggttctggatgattactcccagcaac
gagttccgtggctgcggacccgtcaaacaagatcttacttctcatctcggacccaccact
ctctctatgtttacaagtgtacactacgtggggaaagatatgaacactagttatacaagc
aaggagccgtggaagaaggtgtttggtcctgtttttgtttatctcaactctgcatcttct
cgtaatcttctctggaccgacgctaaacgacagatggtttccgaggtccaaagctggcct
tatgatttcgtgaagtccgtagattaccctctttatcaccaaagaggaacaattaaaggt
caactctttgttaaagacaggtacaacaaaatcaaggcaaacttattcgaggaatatgct
tttgtgggattagcattacctggtgaagctggttcatggcaaaccgaaaacaagggatat
caattttggacacgagcagacaaaacggggatgttcacgatagctaatgtgagacctggg
acgtatagtctctacgcatgggttcctggatttatcggtgactataaatacgagcgtgac
attaccatcacaccaggtaaggagataaacattggacctatagtgtacgagccaccgaga
aacggtcagacactgtgggagatcggagaaccggaccgaaccgccgcagagttctatatc
ccagaaccggacccagcccttttcaccaaactctcttttaatcactcaaatcctcaagac
agatttagacaatatggtctatgggatcgttacagtgctttatatccacgaaacgatctt
gtttttattgctggattgagtgactataaaaaagactggttctatgcccatgtcaacagg
aaagctggaaacgggacatatgaagcaacgacatggcaaattaagttcaatttaaaagca
gtgactcaaactggaaactacacacttcgaatagctttggctgcagccacaactgttaat
ttaatggttcaggtcaacgaagctgattccaaacctatcttcatgtctgggctaataggc
cgggataacgcgatcgcgaggcatgggattcatgggctgtacaaattgtacaatatcgat
gttaatgggaagttacttagggttggtaataatacgatatttcttactcatggtcggaac
actactgattcgttttcaggtgtaatgtatgattatcttcgtttggaaggtccttccgga
gtctga
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