Capsella rubella (pink shepherd's-purse): 17880030
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Entry
17880030 CDS
T02984
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 16
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
crb01002
]
17880030
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
crb04121
]
17880030
Enzymes [BR:
crb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
17880030
Peptidases and inhibitors [BR:
crb01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
17880030
Ubiquitin system [BR:
crb04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
17880030
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
Motif
Other DBs
NCBI-GeneID:
17880030
NCBI-ProteinID:
XP_023635593
LinkDB
All DBs
Position
Unknown
AA seq
1021 aa
AA seq
DB search
MLLVLDLGISTLVLVISIVLPLIGFTVRHKWRVAAQRREEIRRLLIHASQEADRAEREAS
VEFSSVAVSNVFHCPVCYCLATTRCSRCKSVRYCSGKCQIIHWRQGHKDECLPASIIYDN
EDEKSDSDLSCREENEQNTLDETLLVHPVPDSMPSGEAIFSNPAKSPEDGNGDFADNKDD
LIDKEEAVSVAETSGSSFSGFSSSPRNDSGDEISSRCDSFSSSDSERSESPLDAHVSAES
EETCFNTIDDVPSKPLSPKFVHLVESVDNLASLPKLSLHNPGGDTGQNHIQSSSLHSLVT
DRYPGSADPSPLKSSDFWGTALGSAECLSENCDSSKSDGPGNSSLHFSFGSSSDTSAAKV
SGLKSSISEEAPRYSEEAPRTVSVSSSVEVNVKERKAKRSVKAETSLPTFASTDAPRSLG
TTDLSPMILQKSKSASSESRCMLAPRKVGEVQILASKASNAREYTDVMKHSPLGAKTGRV
LDHQKQNGVAVHPINSLHGRSGLKASVLKVVDQWTRPKSSAENEMAGRHGHKGLFPYEDF
SKLYTNKIEFQPCGLINVGNSCFANVVFQCLMFTPPLTAYFLQQLHSRACPNKEQCFTCG
FEKLVLKAKEGKAPLSPNGLLSQLKSIGIFLGNGKEEDAHEFLRFVVDTMQSVCIKASKY
DKPKTSKLEDTTLIGLTFGGYLRSKIKCMKCQGKSELHEKMMDLTVEIDGDISTLDDALR
RFTRTEILDGENKYRCGSCKSYERAKKKLKITEPPNVLTIALKRFQAGKFGKLNKLIRFP
ETLDLAPYVSGGSEKSHDYKLYGVIVHLDIMNAAFSGHYVCYIRNQNKWYKADDSTVVTS
DVERILTKGAYMLFYARCSPMSPRLIVCTKSEGSHKKSRVPIPKASEKSSISVPRSVSTS
SPLLSSNTPGGGRSGNIQSFYSSFQRLQKILEDDSSSDSSSLFDSNSDECSCSTDSTSMD
DFADFIFGDHQGRAHGQSEAPSPTSSSSSSSPLFTRHSPLSRSSPETNGTSRHQLPLGGE
R
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atgctccttgttttggatctagggatttcgactcttgtcctcgtgatctctattgttcta
cctttgatcggcttcactgttcgtcacaaatggagggtcgcggcccaaagaagggaagag
attagacgacttcttattcatgcctctcaagaggctgatagggctgagcgagaggcttct
gttgagttctcttctgttgccgtctctaatgtcttccattgtcctgtctgctattgtctt
gccaccactcgatgctctcgctgcaaatccgttcggtactgttctgggaaatgtcaaatc
attcactggcggcaaggtcacaaagatgaatgtcttcctgcttccattatatatgataat
gaagatgagaaaagtgattctgatctgagttgcagagaagaaaatgaacagaatactctt
gatgaaactttattggtgcatccagtaccagattctatgcctagtggggaagcaatattc
tctaatcctgctaaatctccggaagatggaaatggagattttgcagataacaaagatgac
cttatagataaggaagaagctgtttctgttgctgaaacatctggatcctcgttttctggt
ttctcctcctcccctcgtaatgattctggtgatgagatttcttctcgctgtgatagcttc
agttcatctgattccgagagatcagaatccccacttgatgctcatgtttctgcagagtca
gaggagacctgtttcaacaccatagatgatgttccatccaaaccgttgtctcctaaattc
gtgcatttggttgagtctgtagataacctcgctagtttgcctaaattaagtctgcataat
cctggtggtgatactgggcagaaccatatccaatcaagtagcttacactcattagttacg
gataggtatccaggatccgctgacccgtctcctctgaagtcatctgatttttggggtacg
gctcttggatcagcagaatgtctgagtgagaattgtgatagttctaaatctgatggacct
ggtaattcctctctgcatttctcctttggctcctccagtgacacttcagctgctaaagtc
tctgggcttaagagtagcatttcagaagaagctcccaggtattcagaagaagctcccagg
actgtatcagtgagttcttctgttgaagtgaatgtaaaagaaagaaaggctaaaagatct
gttaaagctgaaacttcgttaccaacttttgcttctactgatgcgccaaggtctttaggc
actactgatttgtcccctatgatccttcagaagtcaaagagtgccagtagtgaaagtcgc
tgtatgttggcccctaggaaggttggggaagtccaaattttggcatcgaaggcctcaaat
gctagggagtatactgatgttatgaaacattctcctctaggtgcaaaaactggaagagtt
cttgaccatcagaaacagaatggtgttgccgttcaccctataaattctctacatggacga
agtggtttgaaggcatcagtacttaaagttgtagaccagtggactagaccgaaatcatca
gctgagaatgagatggcaggaagacatggtcataaggggctctttccatacgaagacttt
tctaagctgtatacaaataaaattgagttccagccttgtggcctcatcaatgttggcaat
agctgctttgctaatgtcgtcttccaatgcctgatgttcacgcctcctttgacggcatac
ttcctccagcagttgcattctagagcatgtccaaacaaagaacagtgcttcacctgtggg
tttgagaagctggtcttaaaggcaaaagaagggaaggctccactgtcccctaatgggttg
ctgtctcagttgaagagtattggaatctttcttgggaatggcaaggaagaagatgcacat
gaattccttaggtttgttgtcgacacaatgcagtctgtgtgcattaaggcatctaaatat
gataagccgaagaccagcaaattagaagatacaactcttattggtttgacatttggggga
tacctccgatcaaagattaaatgcatgaaatgtcaaggaaaatctgagcttcacgagaaa
atgatggatctaacagttgagattgatggggatattagcaccttggatgatgctttgcgt
cgatttacaaggactgagatattggatggagaaaacaaatacagatgtggcagctgtaaa
tcctatgagagagccaaaaagaagctgaaaattacggaacctcctaatgtccttacaatt
gcactaaaacgattccaggcagggaaattcgggaagctcaataagttgataaggtttcca
gaaactctagatttggctccatatgtcagcggaggaagtgaaaaatcacatgactacaaa
ctctatggagttattgttcacttggatataatgaatgcggcgttttctggccactatgtc
tgctatatcagaaatcaaaataagtggtacaaggctgatgatagcacggtagtaacttct
gacgttgaaaggatcttgacaaagggagcgtatatgttgttctacgcaaggtgctctcca
atgtctccaagattaatagtgtgtaccaaatctgaaggatcccataaaaaaagcagagtg
ccaatacctaaggctagtgagaaaagtagcatatcagtgccacggtctgtgtctacttca
agtcctctgttgtcttccaacactcccggtggtggtcgatctggcaatatacagtcgttt
tattccagtttccagaggctgcagaaaattttagaagatgattcatcaagtgacagttct
tctctatttgacagcaactcagatgaatgctcttgtagcacagacagcacaagcatggat
gattttgctgatttcatttttggagatcatcaaggacgtgcccacggacagtccgaggct
ccttcaccaacatcatcgtcttcctcgtcttctcctctcttcacaaggcattcgccgctg
agtcgttcttctccagaaactaacggaacctcaagacatcagttgcccttgggaggagaa
aggtga
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integrated database retrieval system
