Capsella rubella (pink shepherd's-purse): 17880038
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Entry
17880038 CDS
T02984
Name
(RefSeq) tRNA (cytosine(34)-C(5))-methyltransferase isoform X1
KO
K15334
multisite-specific tRNA:(cytosine-C5)-methyltransferase [EC:
2.1.1.202
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
crb03016
]
17880038
Enzymes [BR:
crb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.202 multisite-specific tRNA:(cytosine-C5)-methyltransferase
17880038
Transfer RNA biogenesis [BR:
crb03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
17880038
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Pre-PUA_NSUN2
PUA_NSUN2
FtsJ
Motif
Other DBs
NCBI-GeneID:
17880038
NCBI-ProteinID:
XP_006283165
UniProt:
R0GY72
LinkDB
All DBs
Position
Unknown
AA seq
771 aa
AA seq
DB search
MGRGRRHRGTSKRNQIEKSKENVQRPLKSDASFDSNFQKPISSNLDFEEYYKEQRIVKAK
EWDSFMEILRKPLPAAFRVNSNGQFCDDLRLKLENDFMESLQAEAVESGESEAIKPLPWY
PKNLAWHSNFSRKEIRKNQTLERFHEFLKLETEVGNMTRQESVSMVPPLFLDVHPDHFVL
DMCAAPGSKTFQLLEIIHESSEPGSLPNGMVVANDVDYKRCNLLIHQTKRTCTTNLMVTN
NEGQHFPNCKTKEASDTNHQSIDQLLFDRVLCDVPCSGDGTLRKAPDIWRRWNSGSGNGL
HSLQVVLAMRGLSVLKVGGRMIYSTCSMNPIEDEAVVAEILRRCGCSVELVDVSHKLPEL
IRRPGLKKWKVHDRGGWYRSYKDVPKSQRDGVLKSMFPSGKSDKESTGGGDRYGDMTSIS
SDESAEEVCDLPLERCMRILPHDQNTGGFFIAVLHKVSPLPEFQEKINQRRNFSTRKNIN
SCEAVSGTVVTKPEEGAEEDTILEEVVSENGFEHPENDNISEVGIVELAQKLDDMGVRRE
VPAMQGKWKGLYPVVFLRDETVINGIKTFYGIKDESFPLYGHLVTRNSDISSHGNVKRIY
YVSKAVKDVLELNFSVGKPLKISSVGLKMFEKQSAKECEANCCSFRITSEGLPVILPYMT
KQILYATMADFKNLLQQKSIKFLDFIHPQIGEKAAELALGSCVMVLVDDTQLGSEPVKVN
SSTIAIGCWKGKASLTVMVTTLDCHQLIQRLSDRSKEVENAENCFKTAETD
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgggaagagggagacgacacagaggtacttcgaagaggaaccagatcgagaagagtaaa
gagaatgtccaaagacccctcaaatccgatgcttcctttgattccaacttccaaaagcca
atctcgtcaaatcttgatttcgaggagtactacaaggagcaaaggatagtgaaagcaaaa
gagtgggattcgtttatggagattcttcgtaagccattgcctgctgcttttagagttaat
tccaatggccaattttgcgatgatcttcgactgaagttggagaatgatttcatggaatct
cttcaggctgaggctgtagagagtggtgaatcagaggctatcaagcctttgccttggtat
cctaagaatcttgcttggcattctaatttttcgcgcaaggagattaggaaaaaccagaca
cttgagaggtttcatgagttcctaaagttagaaactgaagttgggaacatgaccaggcaa
gaatcagttagcatggttccacctctcttccttgatgtacatccagatcattttgtactc
gacatgtgtgctgcacctggttccaagacatttcagctgcttgaaataatacatgaatca
tcagaaccaggatctctacctaatggaatggtggtggccaatgatgttgattataaaaga
tgtaaccttcttattcaccagacgaaaagaacgtgtacaaccaacttgatggtcactaac
aatgaaggtcaacatttccctaactgcaaaaccaaagaagcatctgacactaatcatcaa
tccattgaccagcttctctttgatcgtgtcctatgcgatgtcccatgtagtggtgatggt
actctgcgcaaggcaccagacatatggagaagatggaattctggatctggcaatggactt
catagtctacaggttgtgctggccatgagaggtttatctgtgttaaaagttggtgggaga
atgatatactcaacctgctcaatgaacccgattgaagatgaagccgttgttgctgaaatt
ctgaggaggtgtggatgctctgttgagcttgtagatgtctcacataagcttcctgaactt
attagaagaccaggtcttaagaaatggaaggtgcatgatagaggtggctggtatagatct
tacaaagatgttccaaagtcacagagagacggagttcttaagagcatgtttccttctggt
aaaagtgataaagagtcaacaggtggcggagacagatacggagacatgacttctatctct
tctgatgaatcagccgaggaagtctgtgatcttccccttgaacgttgtatgaggatactg
cctcatgatcaaaacactgggggatttttcattgcagtccttcacaaagtttcaccttta
ccagagtttcaggagaaaataaatcagagaaggaatttttctactagaaagaacatcaac
tcgtgtgaagcagtatctggcactgtggttactaaacctgaagagggtgcagaggaggat
acaattttagaagaagtagtttcagagaatggctttgagcaccctgagaacgataacatc
agcgaagtaggaatcgtagaattggctcaaaaacttgatgatatgggagtaaggagagaa
gtaccagcaatgcaaggaaagtggaaaggcctttaccctgttgttttcttgagagatgaa
acagtgatcaacgggatcaagacattttatggcatcaaagatgaatcgtttccgctgtat
ggtcatctcgtgaccagaaacagtgacataagcagccatggaaacgtcaaaaggatttac
tatgtttcaaaagcagttaaggatgttcttgaactaaatttttcagttgggaagccgctc
aagatctcctctgttggcctcaagatgtttgagaaacaatcagcaaaagaatgtgaagcc
aactgttgctcattccgaataacgtcagagggattgcctgtgatccttccgtacatgacc
aagcaaatactttatgcaacaatggcggatttcaagaatctcttgcaacagaaatcaatc
aagttcctagatttcatccatccacagatcggagagaaagcagcagaactcgccttggga
tcttgcgttatggttcttgttgatgatactcagctagggtcagaaccagtcaaagtgaat
tcatcaacaatagccattggatgctggaagggtaaagctagcttaaccgtcatggtcaca
acactcgactgtcaccaacttatccagagactttctgatagaagtaaagaagtagaaaat
gctgagaattgtttcaagactgctgagacagattga
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