KEGG   Capsella rubella (pink shepherd's-purse): 17880395
Entry
17880395          CDS       T02984                                 
Name
(RefSeq) tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like
  KO
K05544  tRNA-dihydrouridine synthase 3 [EC:1.3.1.89]
Organism
crb  Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:crb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:crb03016]
    17880395
Enzymes [BR:crb01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.1  With NAD+ or NADP+ as acceptor
    1.3.1.89  tRNA-dihydrouridine47 synthase [NAD(P)+]
     17880395
Transfer RNA biogenesis [BR:crb03016]
 Eukaryotic type
  tRNA modification factors
   Dihydorouridine synthases
    17880395
SSDB
Motif
Pfam: Dus zf-CCCH_DUS3L zf-CCCH_4 zf-CCCH zf_CCCH_4
Other DBs
NCBI-GeneID: 17880395
NCBI-ProteinID: XP_006283248
UniProt: R0F426
LinkDB
Position
Unknown
AA seq 684 aa
MSDSVAELAADTSVGEDAKPVQSTKQFSVYEATSKELIERSMAPIKKEFLCPPPSRSGKQ
NDAELKAPQSGLVQEKKSKRQLKRERREQSTINLCPQVARTEDVNSCQYKDNCRFNHDID
AFKAQKPDDIEGQCPFVASEMKCAYGLSCRFLGTHREIAGNSDGKEELNFFNKETQRLLW
KNKMTFINADAKLKSLGLLGHAKKSNAAEENNAEKPQNGANVTQATEVAVDSAVSSEPTS
EMIKDVDIPRPLETEEVRPMKKAKSENVDKLNPGDVGGVNDGVQVEEETQKNGYSTSKGD
VKDEDSIKIVETDGSLKLHPREKKKLIDFRDKLYLAPLTTVGNLPFRRLCKVLGADVTCG
EMAMCTNLLQGQASEWALLRRHSSEDLFGVQICGSFPDTVSRTVELIDRECTVDFIDINM
GCPIDMVVNKSAGSALLNKPLRMKNIVEVSSSIVETPITIKVRTAFFEGKNRIDSLIADI
GNWGATAVTIHGRSRQQRYSKSADWDYIYQCTKNASTNLQVIGNGDVYSYLDWNKHKSDC
PELSSCMIARGALIKPWIFTEIKEQRHWDITSGERLNILKDFVRFGLQHWGSDTKGVETT
RHFLLEWLSYTFRYIPVGLLDVIPQQINWRPPSYFGRDDLETLMMSESAGDWVRISELLL
GKVPEGFTFAPKHKSNAYDRAENG
NT seq 2055 nt   +upstreamnt  +downstreamnt
atgtccgattcagtagcggagctcgcggcggatactagtgttggagaagatgcaaagcct
gtccaatcgacgaaacagttctctgtgtatgaagcgacttcgaaagagcttatagaacga
tcaatggctcctattaagaaggagttcctatgtcctcccccaagccgttccgggaagcaa
aatgacgccgaattgaaggcgcctcagtctggcttggtccaggagaagaaatcgaaacga
cagctcaaacgggaacgccgtgagcaatctaccatcaatctctgtccccaggttgcgaga
acagaagacgttaattcctgtcagtataaagataattgtcggtttaatcatgatattgac
gctttcaaggctcagaaaccagatgatatagaggggcagtgcccatttgtggcctctgag
atgaagtgtgcatatggtttatcatgtagattcttaggcactcacagagaaattgctggt
aattcagatgggaaggaggagctcaacttttttaacaaagagacccagaggcttctgtgg
aagaataagatgacttttatcaacgcagatgcgaagctcaagtcccttggtctgttggga
catgccaaaaaaagcaatgctgctgaagaaaataacgcagaaaaacctcaaaatggtgca
aatgtcactcaagcaactgaagtggcggttgactcagctgtcagctctgagcctacatca
gaaatgataaaagatgttgatattcctcgaccattagaaactgaggaagttcgtcccatg
aaaaaggcaaaatctgagaacgtagataaactcaatcctggagatgttggtggagttaat
gatggcgtgcaagtggaagaggaaacccaaaagaatgggtattctacttcaaaaggtgac
gtaaaagatgaggatagcatcaaaattgttgaaactgatggtagtctaaagttgcaccct
cgtgaaaagaaaaagcttattgattttagggataagttataccttgcacccctgacaact
gtgggcaatcttcccttccgaagactttgcaaagtgttgggagcagatgtgacttgtggt
gagatggctatgtgcacaaatcttttgcagggtcaagcttcggagtgggctctacttaga
cggcattcatcagaagatctgtttggtgttcagatttgcggttcttttcctgatacagtg
tcgcgcacagttgagcttatagatcgagaatgcactgttgatttcattgacatcaatatg
ggttgcccgatagatatggttgtcaacaaaagtgctggttcagctcttctcaacaaacca
ttacgaatgaaaaacatagtggaagtttcttcttccattgttgaaacacctatcactatc
aaggtacgtacggcattctttgagggtaagaatcggatagattcattaattgcagatatc
ggaaattggggagccactgcagtgactattcatgggcgatcaaggcagcaacgttatagc
aagtctgcagattgggactatatatatcagtgtaccaaaaacgcttcaactaacctacaa
gttataggaaatggagatgtgtactcttatttagactggaacaaacacaagtctgactgt
cctgagttgtctagctgcatgattgctcgtggagcattgatcaagccttggatatttact
gaaatcaaagagcaacgtcactgggacattacctccggagaaaggctaaacatcttgaag
gactttgtacgttttggtcttcaacattggggatccgacacaaaaggagttgaaacaact
aggcattttttgctggagtggctaagctacacgtttaggtacatacctgtcggtttgctt
gatgtaatcccgcagcaaatcaactggcgcccgccttcttactttggtcgtgatgatctt
gagacactcatgatgtctgaatctgctggtgactgggtgcggatatctgaattgctgctt
ggaaaggttccggaagggttcacatttgcccccaagcacaaatccaatgcttatgaccgg
gctgaaaatggctga

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