Capsella rubella (pink shepherd's-purse): 17880397
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Entry
17880397 CDS
T02984
Name
(RefSeq) ABC transporter B family member 28
KO
K05657
ATP-binding cassette, subfamily B (MDR/TAP), member 10
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
17880397
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
crb02000
]
17880397
Transporters [BR:
crb02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
17880397
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
RsgA_GTPase
AAA_16
AAA_30
AAA_29
AAA_25
AAA_21
AAA_28
AAA_15
Motif
Other DBs
NCBI-GeneID:
17880397
NCBI-ProteinID:
XP_006286259
UniProt:
R0FAU9
LinkDB
All DBs
Position
Unknown
AA seq
713 aa
AA seq
DB search
MASATTLLFHHGSTRFVVAHRRCQASVLRTCGPKPFLPFRSLPVSTAQFRPLLRAKSDGL
ARAYVTGAPPIVDEPDPKIEESKSEALSKDLISWGLVSSLLDKHKLRLVVCLLTLVGCSA
CTLSMPIFSGRFFEVLIGARPDPLWQLLSKIAVLYSLEPIFTIAFVTNMNAIWENVMATL
RAQIFRRVLIQKAEFFDKYKVGELTGLLTSDLGALNSIVNDNISRDRGFRAFSEVFGTIC
ILFTLSPQLAPVLGLLMLAVSVLVAVYKRSTAPVYKAHGLAQATMSDCVSETFSAIRTVR
SFSGEKRQMSLFGSQILAFQRSGLKLGTFKSINESITRVAVYISLLALYCLGGSKVKTGE
LAVGTVVSFIGYTFTLTFAVQGLVNTFGDLRGTFAAIDRINSILNAVDIDDALAYGLERD
IHTKKVQDENLRLFLSSGPNVNIRHLDKYYMSDLKSTNNLRTLTWAGDVCLEDVHFAYPL
RPDVKVLDGLSLTLNSGTVTALVGSSGAGKSTVVQLLARFYEPTLGRITVGGEDVRMFDK
SEWAKVVSIVNQEPVLFSLSVAENIAYGLPNDHVSKDDIIKAAKAANAHDFIISLPQGYD
TLVGERGGLLSGGQRQRVAIARSLLKNAPILILDEATSALDAVSERLVQSALNRLMKDRT
TLVIAHRLSTVQSAHQIAVCADGKIIELGTHSELVAQKGSYASLVGTQRLAFE
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctgcaaccacactcctcttccaccacggttccactcgattcgtcgtcgctcat
agacgttgccaagcgtctgtccttagaacatgtggaccaaagccctttcttcccttccgc
agtttacctgtttccactgcgcagtttcggcctttgttgagagcaaaatccgatggattg
gcccgggcttatgtcactggagcgccgcctattgtcgacgaacctgacccaaagattgaa
gaatccaaatctgaggctctatcgaaggatttaatcagctgggggcttgtgtcgagcttg
ttggataagcacaagcttagactcgttgtttgcttattgactctcgttggatgcagcgcc
tgcactctttctatgcctattttttctggtagattctttgaagtattgattggggcgaga
ccggatcctctgtggcagctgctgagcaaaatcgctgtcttgtactcgttggaacccatc
tttactattgcttttgtgaccaacatgaatgctatctgggaaaacgttatggcaacctta
agagctcagattttcagaagggttttgatccagaaggcagagtttttcgacaaatataag
gtaggagagctgacgggactgctcacgtctgatcttggtgctctgaatagcattgtgaat
gataacatctcccgagatcgtgggtttagggccttttccgaggtttttggaacaatctgc
attctttttactctctctcctcaacttgcacctgtgcttggtctgttgatgcttgctgtt
tcagttttagttgctgtatacaagaggtcgactgctcctgtttataaagcacatggatta
gcccaagctacaatgtctgattgtgtatcagaaacattttctgcaatccgaactgtaaga
tcattcagtggtgaaaaacgtcagatgtctctcttcggtagccagattcttgctttccag
cgtagcggcttaaagcttggtacttttaaatcaattaatgaatctataacaagagttgct
gtttatatatcactgttggctctttactgtcttgggggaagcaaggtgaagacgggtgag
ctcgcagttggaacagttgtttcgttcattggatacacatttactctaacatttgctgtc
caagggcttgtaaacacattcggagatctacgtgggacttttgctgctattgacaggatc
aactccattttaaacgcggtggatatagatgatgctcttgcctatgggttagaaagagat
attcatacaaagaaagtccaagacgaaaaccttagattgttcttgtcttctggccctaat
gtaaatatccgtcaccttgataagtactacatgtcagatctgaaatcaactaacaatcta
cgcaccctaacatgggcaggagatgtctgtcttgaagatgtacattttgcttatcctcta
cgacccgacgtgaaagttcttgatgggctcagtttgacgttgaattctggtaccgtaact
gctcttgttggctctagtggcgcgggaaaaagtactgttgtacagttattggcacgattt
tatgagccaacactaggacgtattactgtgggtggagaggatgtgaggatgtttgacaag
agtgaatgggctaaggttgtttcaattgtgaatcaggaacctgttctcttttctctctct
gtggccgaaaatattgcatatggtctccccaatgatcatgtgtccaaggacgacatcatt
aaggcagccaaagctgccaacgctcatgacttcataatctcacttcctcagggctacgat
acactggttggtgaaaggggaggcttgcttagcggaggacaaagacagagagttgccata
gctcggtctctgctgaagaatgcccccatcttgattctcgatgaggccacaagtgcgctt
gatgcagtgagtgagcgcttagtccagagtgcattgaaccgtctgatgaaagacaggaca
acattagtcatagctcacagattaagcacagtccagagcgcgcatcagattgccgtatgc
gctgatggaaagatcatagagcttggaacacattctgaattggtggcacaaaagggatca
tatgcttcacttgttggcactcagaggctggcctttgagtaa
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