Capsella rubella (pink shepherd's-purse): 17880408
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Entry
17880408 CDS
T02984
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb00040
Pentose and glucuronate interconversions
crb01100
Metabolic pathways
Module
crb_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
17880408
Enzymes [BR:
crb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
17880408
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
17880408
NCBI-ProteinID:
XP_006286100
UniProt:
R0H667
LinkDB
All DBs
Position
Unknown
AA seq
396 aa
AA seq
DB search
METTLRIWILISFLYFVLVNGQNYNVLNFGAKGDGQTDDSKVFVQAWNAICRGDGDIKTL
LIPSDKTFLLQPTVFQGPCKSSSIKVQLDGVIVAPSDKGSWPNPTSKMWIKFSYVYGLII
VGSGTINGRGSSFWELKLKASQRPTALHISNCDNLRINGITSIDSAKNHLSINKCNTVAI
SKINLFAPETSPNTDGIDISDSTNINIFDSTIQTGDDCIAINSGTSNINITGINCGPGHG
ISVGSLGAGGAEATVSNVQVSHCTFNQTANGARIKTWLGGQGYARNISFTDITLINTKNP
IIIDQQYIDKRHLAAEESAVAISNVKYVGFRGTTSNKNAITLKCSETTHCRDVVMDGIDI
TLADGGKPKVDCQNVDGKSSDIDLMRDCFKHSTSFN
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccacattacgtatttggatcttgataagtttcttatattttgttctcgtaaat
ggtcaaaattacaatgtactcaattttggtgctaaaggagatggtcaaactgatgattca
aaggtttttgttcaagcatggaatgcgatatgtcgtggagacggagacatcaaaacactt
cttattccctctgacaaaacatttttacttcaacctacagtgttccaaggtccatgcaaa
tctagctctataaaggttcagttggatggagttatcgtcgcacctagcgacaaaggatca
tggcccaaccccacatctaaaatgtggatcaaattttcatatgtgtatggtttaatcatc
gttggttcgggaacgattaacggtcgtggttcatctttttgggagctaaagttgaaagct
tctcaacgaccaacagcattacatattagtaattgcgataacttgaggataaacgggata
acctcaattgatagtgcaaaaaaccatttatcaatcaacaaatgcaatactgttgcaata
tccaagataaatctttttgcacccgagacaagtcccaatactgatggaattgatataagt
gattcaactaatatcaacatatttgactctacaattcaaactggagacgattgcatagca
atcaacagtggaacttccaatatcaacatcacaggaattaattgtggaccaggtcatggg
ataagcgtaggaagtcttggagccggtggagcagaggctacggttagtaatgtacaagtg
agtcactgcactttcaaccagacggctaatggagctagaatcaagacatggctgggtgga
caaggatatgcaagaaacataagttttaccgatattacactcattaacacaaaaaatccg
attataatagaccaacaatacattgataaaagacatcttgctgcagaggaatcagcggtg
gcgattagcaatgtaaagtatgtcggctttcgcggaacaacatcgaataaaaatgctata
acgcttaagtgtagtgaaaccacacattgtagagacgtcgttatggatggcattgatata
accttggcggatggaggaaaacctaaagttgattgtcaaaacgttgatggaaagtctagt
gatattgatctgatgcgggactgctttaaacatagcactagttttaactaa
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