Capsella rubella (pink shepherd's-purse): 17880544
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Entry
17880544 CDS
T02984
Name
(RefSeq) 25S rRNA (cytosine-C(5))-methyltransferase nop2
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
crb03009
]
17880544
Enzymes [BR:
crb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
17880544
Ribosome biogenesis [BR:
crb03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
17880544
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
RsmF-B_ferredox
FtsJ
Methyltransf_31
Motif
Other DBs
NCBI-GeneID:
17880544
NCBI-ProteinID:
XP_006283320
UniProt:
R0GYH8
LinkDB
All DBs
Position
Unknown
AA seq
634 aa
AA seq
DB search
MAALTRNKKKGTTNSKSPLMKKAAKPRKPPLKKQRRCILEEKPEVSTEEEIEQSNEGDEG
SESGSDFFSDVDGDKGNDDDDDDDAEPLADDFLDGSSDDVEGTLGSDSNSDSDESDIEKK
SRAIDKKRKKEEQDAKDEFTMNIKEQPDEFQLPTKKELEEEARRPPDLPSLQMRIREIVR
VLSNFKDLRPDGAERKDYVEQLKADLGSYYGYNAFLIGTLVEMFPVVELMELIEAFEKKR
PTSIRTNTLKTRRRDLADVLLNRGVNLDPLSKWSKVGLIVYDSQVPIGATPEYLAGFYML
QSASSFLPVMALAPREKERVVDMAAAPGGKTTYVAALMKNTGIIYANEMKVPRLKSLSAN
LHRMGVTNTIVCNYDGRELPKVLGQNSVDRVLLDAPCSGTGVISKDESVKTSKSADDINK
FAHLQKQLILGAIDLVDANSKTGGYIVYSTCSIMIPENEAVIDYALKKRDVKLVPCGLDF
GQPGFNSFREHQFHPSLEKTRRFYPHVHNMDGFFVAKLKKMSNAMQPSENDEPVETTEQS
RVSSSDDDDEAEAIEELEKPSVTKENKNKQKFRRSKETHKDKRNKDIKTKSGTVEEPRKQ
KKKRSQWKNEIAQAREEKRNAIRESAKERPKHRG
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggctgctcttacgcgtaacaagaagaaggggactactaattcaaagtcccctctaatg
aagaaggcggcgaaaccccggaagcctccactgaagaagcagagaagatgcattttggag
gaaaagcctgaagtttctactgaagaggaaattgaacagtctaatgaaggagatgaaggg
tctgaatcaggttctgactttttctcagatgttgatggagacaaaggaaacgatgatgat
gatgatgatgatgcagagcccttggctgacgactttcttgatggtagcagcgatgatgtg
gagggaactttgggttctgattcgaattctgactctgatgaatccgatattgagaaaaaa
tctagagctattgataaaaaacgtaaaaaggaggaacaagatgcaaaagatgaattcact
atgaacattaaggaacaacctgatgagtttcagctaccaaccaaaaaggaacttgaagaa
gaggctcgtaggcctccagatcttcctagcttacaaatgaggattagagagattgttaga
gtgctgtcgaattttaaggatttgaggccagatggagccgagaggaaggattatgttgag
cagcttaaagctgatcttggttcttattacggttataatgcgtttcttatcggaacttta
gtcgagatgtttcctgttgttgaactcatggaactaattgaagcttttgaaaagaaaaga
cctacatctatacgtactaacactctcaagactcggagacgggatctggctgatgtactt
ttgaacagaggagttaatctggacccattaagcaagtggtcaaaagttggacttatcgtt
tatgattcacaagttccaatcggggcaactcctgaatatttggctggtttctatatgttg
caaagtgctagttccttcttgccagtgatggcccttgctcctagagaaaaagagcgagtt
gtggacatggctgctgcccctggtggtaaaacaacttatgttgctgcactaatgaaaaat
acaggcataatatacgcgaacgagatgaaagtacctaggcttaagtcactttctgccaat
ctacatcgcatgggggtgacaaataccatagtttgtaactatgatggaagagagttaccc
aaggttttaggtcagaactcggttgatagagtattgttggatgctccttgcagtggaact
ggagttatatcaaaagatgaatcggttaaaacctccaaaagtgctgatgacataaataaa
tttgcccatttgcaaaagcaacttatacttggtgcgattgatttggtagacgccaattcc
aaaaccggtggatacattgtttattcaacatgctctattatgattcctgagaatgaagct
gtcatcgattatgccctgaaaaagagggatgttaaacttgttccatgtggacttgatttt
ggccaaccaggatttaacagttttagagaacaccaattccacccttctttagagaagact
agacgattctacccgcatgtacacaacatggacggtttctttgttgcaaagctgaagaag
atgagcaatgcaatgcagccttcagaaaatgatgagccagttgaaacaacggagcaatct
cgggtgtcgtctagtgatgatgatgatgaggctgaggccattgaggagttggagaagcct
tctgttactaaagaaaacaagaacaaacaaaaatttcgaaggtcaaaggagactcacaaa
gacaaaaggaataaagacataaaaaccaaaagtggtactgtggaagaaccaaggaagcaa
aagaagaagagatcacaatggaagaatgaaattgctcaagctagggaagagaaaagaaat
gccattagagagagtgctaaggagaggccaaagcacagaggataa
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