Capsella rubella (pink shepherd's-purse): 17880578
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Entry
17880578 CDS
T02984
Name
(RefSeq) indole-3-acetic acid-amido synthetase GH3.5
KO
K14487
auxin responsive GH3 gene family
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
17880578
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Motif
Pfam:
GH3
GH3_C
GH3_M
Motif
Other DBs
NCBI-GeneID:
17880578
NCBI-ProteinID:
XP_006283319
UniProt:
R0F3G0
LinkDB
All DBs
Position
Unknown
AA seq
612 aa
AA seq
DB search
MPEAPKHESLEVFDLTLDQKNKQKLQLIEELTSNADQVQRRVLEEILTRNADVEYLRRHD
LNGRTDRETFKNVMPVITYEDIQPEINRIANGDKSLILSSKPISEFLTSSGTSGGERKLM
PTIEEELDRRSLLYSLLMPVMSQFVPGLDKGKGMYFLFIKSESKTPGGLPARPVLTSYYK
SSHFKERPYDPYTNYTSPNETILCPDSYQSMYSQMLCGLCQHQEVLRVGAVFASGFIRAI
KFLEKHWTELVRDIRTGTLSALITDPSVREAVAKILKPSPKLADFVEFECKKSSWQGIIT
RLWPNTKYVDVIVTGTMSQYIPTLDYYSNGLPLVCTMYASSECYFGVNLRPLCKPSEVSY
TLIPTMAYFEFLPVHRNNAVTNSISLPKALTEKEQQELVDLVDVKLGQEYELVVTTYAGL
CRYRVGDLLRVTGFKNKAPQFSFICRKNVVLSIDSDKTDEVELQNAVKNAVTHLVPFDAS
LSEYTSYADTSSIPGHYVLFWELCLDGNTPIPPSVFEDCCLAVEESLNTVYRQGRVSDKS
IGPLEIKIVEPGTFDKLMDYAISLGASINQYKTPRCVKFAPIIELLNSRVVDTYFSPKCP
KWVPGHKQWGSN
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaggcaccaaagcacgagtctttagaggttttcgatctgacgcttgaccaaaag
aacaagcagaagcttcagttgatcgaagaacttacctctaacgccgaccaagtccagaga
cgggtcttggaggagatcttgacccgcaatgctgacgtcgagtatctcaggcgtcatgac
ctcaacggtcgcactgaccgagagactttcaaaaacgttatgcctgttatcacttacgaa
gatattcagcctgagatcaacaggatcgctaatggtgataaatcccttatcctctcttcc
aaacccatctctgagttcctcaccagctctgggacatctggaggggagaggaagctaatg
ccaacaatcgaagaggaactagacagaagatcactcctctacagtctcttgatgcctgtg
atgagccagtttgttcctggccttgacaaaggcaaaggaatgtatttcttgttcatcaag
tccgaatccaagactccaggaggtctccctgctcgtcctgtcttaaccagctactacaag
tcttcccatttcaaagaaagaccatatgacccttacaccaactacacaagccccaacgag
accatcctttgccctgactcttaccagagcatgtactctcagatgctctgtggcttatgc
caacaccaggaggttcttcgagtcggagctgtcttcgcctctggattcatcagagccata
aagtttcttgagaaacactggaccgagttggtccgtgacatcagaaccggtactctaagt
gccctgataaccgatccttcagtgcgtgaggcggtcgccaagatccttaaacctagccca
aagctcgctgatttcgtggaatttgagtgcaagaaatcgtcttggcaagggatcatcact
aggctttggcctaacacaaagtatgtggatgtgattgtgactgggacaatgtctcagtac
attcctactttggattactacagcaatggcttgcctcttgtctgcacaatgtatgcttcc
tcggagtgctactttggtgtgaacctaaggccactctgcaaacccagcgaggtctcttac
acgctcataccaaccatggcttatttcgagttcttgcctgttcatagaaacaacgctgtt
accaactccatcagccttcctaaggcactcactgagaaagagcaacaagagcttgttgat
ctagttgatgtcaagcttggccaggagtacgagcttgttgtcaccacttatgccgggctt
tgtagatacagagttggtgatttgttaagagtgactgggttcaagaacaaggcacctcag
ttcagtttcatatgtcgcaagaatgtggttctgagcatagattccgacaaaaccgatgag
gttgagcttcagaacgcggtgaagaacgcagtgacacacctcgtcccatttgatgcctca
ctttctgagtacacgagctatgcggacacaagttctattccaggccattatgtcctgttc
tgggagttatgtttggatggaaacacaccgatccctccttcggtctttgaggattgctgc
ttagctgtagaagagtcactcaacacagtttacagacaaggaagggttagtgacaagtcc
ataggcccgctcgagatcaagattgttgagccaggaacatttgataaactcatggattac
gcgatcagcctaggagcatcgattaatcagtacaagacaccgagatgtgtgaagtttgct
ccgatcatcgagctactgaactcgagggttgttgatacttacttcagcccaaagtgtcct
aaatgggttcctggtcacaaacagtggggaagtaactaa
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