Capsella rubella (pink shepherd's-purse): 17880723
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Entry
17880723 CDS
T02984
Name
(RefSeq) serine/arginine-rich splicing factor SR45a
KO
K12897
transformer-2 protein
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
17880723
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
crb01009
]
17880723
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
crb03041
]
17880723
Protein phosphatases and associated proteins [BR:
crb01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
17880723
Spliceosome [BR:
crb03041
]
Common components
Common spliceosomal components
SR proteins
17880723
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
17880723
NCBI-ProteinID:
XP_023633687
LinkDB
All DBs
Position
Unknown
AA seq
237 aa
AA seq
DB search
MADSPPRRRDSRSPSPRKGRARSRSRSRSRSRLRSRSRSRSLPRPISPLRSRGRSRSRSR
GRGEVENPGTTLYVTGLSTRVTDKDLEAHFSKEGKVASCFLVMEPRTRVSRGFAFVTMDS
LKDAERCIKYLNQSVLEGRYITVERSRRKRPRTPTPGHYLGLKSSRENDREGHSSRGRHY
DRDDYRDRRSPRRDYSPRDERRSRRERSYSPYGRSPERRSERRSERSERRYEPRGSR
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atggcggattctcctccaagaagaagggattcacgatctccttcaccccggaaaggacga
gccagatccaggtcaagatctagatccaggtcgaggcttaggtccaggtctaggtcacga
tcgttgcctagacccatatctccgttgagaagccgtgggaggtcaaggtcaagaagccgt
ggaagaggtgaagttgaaaaccctggtacaacgctctatgtgactggtctatctacaaga
gtcactgacaaggatcttgaagcacatttctccaaggaaggaaaggttgcgtcttgtttt
cttgtgatggagccgcgtacccgtgtgtctcgtggttttgcctttgttacaatggatagc
cttaaagatgctgagcggtgcattaaatatctcaaccagtccgtactagaaggccgatac
ataactgtcgaaaggtcccggagaaagcgcccgagaactcccaccccaggccactatctt
ggcttgaaaagctccagagaaaacgatcgagaaggccatagcagtcgagggaggcactat
gaccgtgatgattatagagaccgtaggtcaccaagacgtgactattcacctcgtgatgag
agaaggtctagaagagagaggtcttactctccttatggaagaagcccagagagaaggtca
gaaagaaggtcagagaggtcagagagaaggtatgaaccccgtggctctagatga
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