Capsella rubella (pink shepherd's-purse): 17880748
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Entry
17880748 CDS
T02984
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 37f
KO
K09490
endoplasmic reticulum chaperone BiP [EC:
5.6.1.10
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03060
Protein export
crb04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
17880748
04141 Protein processing in endoplasmic reticulum
17880748
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
crb03110
]
17880748
04131 Membrane trafficking [BR:
crb04131
]
17880748
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
crb04147
]
17880748
Enzymes [BR:
crb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.10 non-chaperonin molecular chaperone ATPase
17880748
Chaperones and folding catalysts [BR:
crb03110
]
Heat shock proteins
HSP70 / DNAK
17880748
Membrane trafficking [BR:
crb04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
17880748
Autophagy
ER-phagy
ER stress-related proteins
17880748
Exosome [BR:
crb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
17880748
Exosomal proteins of other body fluids (saliva and urine)
17880748
Exosomal proteins of colorectal cancer cells
17880748
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
Radial_spoke_3
FGGY_C
Hydantoinase_A
DUF7357
Motif
Other DBs
NCBI-GeneID:
17880748
NCBI-ProteinID:
XP_006286332
UniProt:
R0H3F8
LinkDB
All DBs
Position
Unknown
AA seq
582 aa
AA seq
DB search
MARSFGANGTVVLAIIFFGCLFAFSTAKEEATKLGSVIGIDLGTTYSCVGVYKNGHVEII
ANDQGNRITPSWVGFTDSERLIGEAAKNQAAVNPERTIFDVKRLIGRKFEDKEVQKDRKL
VPYQIVNKDGKPYIQVKIKDGETKVFSPEEISAMILTKMKETAEAYLGKKIKDAVVTVPA
YFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSV
LTIDNGVFEVLSTNGDTHLGGEDFDHRIMEYFIKLIKKKHQKDISKDNKALGKLRRECER
AKRALSSQHQVRVEIESLFDGVDFSEPLTRARFEELNNDLFRKTMGPVKKAMDDAGLQKS
QIDEIVLVGGSTRIPKVQQLLKDFFEGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETK
DIFEVDANGILNVKAEDKASGKSEKITITNEKGRLSQEEIDRMVKEAEEFAEEDKKVKER
IDARNALETYVYNMKNQVNDKDKLADKLEGDEKEKIEAATKEALEWLDENQNSEKEEYDE
KLKEVEAVCNPIITAVYQRSGGAPGAGGEPTAEDDDESHDEL
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggctcgctcgttcggagcaaacggcactgttgtgctggcgatcatcttcttcggatgt
ttatttgcgttttccactgccaaagaagaggccacgaagctgggatcagttatagggatt
gatcttggtacaacttactcttgtgttggtgtttacaagaatggtcacgttgaaattatt
gccaacgaccaaggaaaccgtattactccttcctgggttggttttactgactctgagagg
ctcattggtgaggctgctaagaatcaagcggctgttaaccctgagaggactatcttcgac
gtcaagagattgatcgggcgaaaatttgaggacaaggaggttcaaaaggacaggaaactt
gtaccttaccagattgtgaacaaggatggtaagccatacattcaagtcaagatcaaggat
ggtgagactaaggttttcagtcctgaggagatcagtgctatgattctgactaagatgaag
gagacagccgaagcttaccttggaaagaaaatcaaggacgctgttgtcaccgttccagct
tacttcaacgatgcccaaaggcaggctaccaaggatgctggtgttattgctgggcttaat
gttgctagaatcatcaacgaacctactgctgctgctattgcctatggtctggataaaaag
ggtggtgagaagaacatccttgtctttgatcttggtggtggtacttttgatgtcagtgta
ttgaccattgataacggagtgttcgaggttctctcaacaaatggtgacactcacttggga
ggtgaggactttgaccacaggatcatggagtactttatcaagttgatcaagaagaagcac
caaaaggacatcagcaaggacaacaaggctcttggtaagctccgaagggaatgtgagagg
gcaaagagagctcttagtagccagcaccaagttcgtgttgagattgagtcactctttgat
ggtgttgatttctctgagccactcaccagagctcgtttcgaggagctgaacaatgacttg
ttcaggaagaccatgggacctgtgaagaaggccatggacgatgctggtctacagaagagc
cagatcgatgagattgtccttgttggtggaagcaccaggatcccaaaggttcagcaacta
ttgaaggacttctttgaaggtaaagagccaaacaagggtgtgaaccccgacgaggctgtt
gcttatggtgctgctgttcagggtggtattttgagcggagaaggcggtgatgagaccaaa
gatattttcgaagtggacgccaacggtattcttaacgttaaggcagaggacaaagcgagt
ggtaaatcagagaagattacaatcacaaacgagaagggtcgtttgagccaagaagagatt
gaccggatggtgaaggaggctgaggagtttgcagaggaggacaagaaggtgaaggagaga
attgacgccagaaatgccttggagacatacgtgtacaacatgaagaaccaagtgaatgac
aaggacaagcttgcagataaattggaaggtgatgagaaggagaagatcgaagcagcaacc
aaggaagccttggagtggctcgatgagaaccaaaactcagagaaagaagagtacgatgag
aagctcaaggaggtagaagcagtgtgtaacccaatcatcactgctgtttaccagagatcc
ggaggagcaccaggtgccggaggagaaccaacggcagaggatgatgatgagtctcacgat
gagctctag
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integrated database retrieval system
