Capsella rubella (pink shepherd's-purse): 17880750
Help
Entry
17880750 CDS
T02984
Name
(RefSeq) transcription factor SPATULA
KO
K28361
transcription factor SPT/ALC
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
17880750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
crb03000
]
17880750
Transcription factors [BR:
crb03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
17880750
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Ribosomal_S20p
Motif
Other DBs
NCBI-GeneID:
17880750
NCBI-ProteinID:
XP_006283961
UniProt:
R0GJ30
LinkDB
All DBs
Position
Unknown
AA seq
369 aa
AA seq
DB search
MISQREEREEKKKKRVMGDKKLISSSSSLYDTRSSNHHPPSSSDEISLFLRHIFDRSSPL
PSYYSPATTTSMIGVHGDPHADNSRCFLSQHPPSDSAFMTTKRVGDFSEVLVGGSSAVGS
ASAAACFGFSGGGNNNAQGNSSGTRVSSSSVGASGNETDEYDCESEEGGEAVVDEAPSSK
SGPSRTSSKRCRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQ
LQLQVQMLTMRNGVNLHPLCLPGTTLHPLQLSQIRPPEATNDPLLNHTNQFTSNSNAPEM
INTVPSSYALEPSIRSHFGPFPLLTSPVDMSREGGLAHQRLNLGHSNTNLTGEQAGFDGQ
QPDLKDRLT
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgatatcacaaagagaagaaagagaagagaagaagaagaagagagtgatgggagataag
aaattgatttcatcttcttcctcgctttacgatactcgcagtagcaatcatcatccacct
tcttcctccgacgaaatctctctgtttctccggcatattttcgaccgttcttctccttta
ccttcttactattctccggcgacgactacttctatgatcggagttcacggtgacccacat
gcagataactcgagatgtttcctttctcaacacccaccgtctgattctgccttcatgaca
acgaagcgcgtcggagatttctctgaggttttagtcggtggaagctcagccgttggatca
gcctctgccgccgcgtgtttcggtttctctggtggtggtaacaacaacgctcagggaaac
agctctggaactagagtgtcgtcttcttccgttggagctagtgggaatgagacagatgag
tatgactgcgaaagcgaggaaggaggagaagctgtggttgatgaagctccttcctccaag
tcaggtccttcgcgtacttcttctaagagatgcagagctgctgaagttcataatctttct
gagaagaggagaagaagtagaatcaatgaaaaaatgaaagctttacagagtctcatccca
aattcaaataagacggataaggcttcgatgcttgatgaagctatagagtatttgaaacag
cttcagctccaagttcagatgttgacaatgagaaatggagtaaacttgcatcctttgtgc
ttacctggaactacattacacccactgcaactctctcagattcgacctccggaagcaacc
aatgatcctttgcttaatcacaccaatcaatttacttcgaattctaatgctccggagatg
atcaataccgtgccttcttcttacgcgttggaaccttccattcgcagtcactttggacct
ttccctctccttacttcacctgtggatatgagtcgagaaggcgggttagctcatcaaagg
ttgaaccttggtcattccaacacaaacttaacaggggaacaagctggttttgatggacaa
caacctgacttaaaagatcgacttacttga
DBGET
integrated database retrieval system
