Capsella rubella (pink shepherd's-purse): 17880783
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Entry
17880783 CDS
T02984
Name
(RefSeq) crossover junction endonuclease MUS81 isoform X2
KO
K08991
crossover junction endonuclease MUS81 [EC:3.1.22.-]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03440
Homologous recombination
crb03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
17880783
03460 Fanconi anemia pathway
17880783
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
crb03400
]
17880783
DNA repair and recombination proteins [BR:
crb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
17880783
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC4
WHD_MUS81
EME1-MUS81_C
HHH_8
CUX1_N
EarA
DUF6429
Motif
Other DBs
NCBI-GeneID:
17880783
NCBI-ProteinID:
XP_006285727
UniProt:
R0H1V4
LinkDB
All DBs
Position
Unknown
AA seq
659 aa
AA seq
DB search
MDDERRTRCPENRGLAAYVLQKKQEHADKPKGLSENLERTFVKAYRNVCDAKDPINTLKQ
LSQIKGFGKWMIKLMKGYFDTGADSSEQEDLPNNRAGIKANGKKRYIPQRNSVAYALLIT
LHRKTTNGKEFMRKQELIDAADASGLSHAPVGPEKGKGKAGLGHSKREWYSGWNCMTTLI
QKGLVVKSSNPAKYMLTVEGREVANECIVRSGLPNSFDILSDDEMDPTPQAKRTPNQNPT
CSFTMREEQPYADPKPMAQSAIPSDIFEKFIPFGYSKEQVVAAFREVSDGTGDNDPSTLW
LSVMCHLRQAEVYSSFSDSQNRRKLSAGPSRAQTRQVDLEGSLTKKFRSCNDGSTLNRCS
SSSSHAVKACSSSLASDRTKGITNFPRLPPLKFGETFEEAYDVMLILDDREKFATKGSRS
RNIIDNICSEFNIKIEVRRLPVGDCIWIARHKCLEDEYVLDFIAERKNVDDMRSSIRDNR
YRDQKLRLQRSGLKKLIYILEGDPNHSDAAESIKTACFTTEILEGFDVLRTNGLGETLRK
YGYLTKSIYQYYKLRVNDNDQGKVAASCPSFDSFVKRCQDLDKMTISDVFAIQLMQIPQV
TEEIAMAVLDMYPTLLSLASAYSHLEGDVCAQEEMLRNQSNNVICASASKIICKLVWGE
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgagagacggacacggtgtcctgagaatcgaggtttagcggcttatgtgttg
cagaagaagcaagaacacgctgataagcccaaaggtttgtcggaaaatctggaaaggaca
tttgttaaggcgtatagaaatgtctgcgacgccaaggatcccattaacacactcaaacaa
ttgtcgcagatcaagggctttggcaagtggatgattaagctcatgaaaggatattttgat
actggtgctgacagttctgagcaagaagatttacctaataatcgtgctgggataaaggcc
aatggcaaaaaacgctacattccacaaagaaattctgtagcgtatgcattactaataacg
ttgcacagaaaaactacaaatgggaaagaattcatgcgtaaacaagagcttattgatgct
gctgacgcgagtggtctctcacacgctcctgttgggccagagaaaggtaaagggaaagca
ggacttggacattctaagagggagtggtatagtggatggaactgcatgaccacacttata
cagaagggattagtggtcaaatctagcaacccagccaagtacatgctgacagttgaagga
cgggaagttgcaaatgaatgtatcgtgcgatctggattacctaattcatttgacatctta
tctgatgatgaaatggatcctacaccccaagcaaagagaacaccgaatcaaaatcccacc
tgttcttttaccatgagagaagaacagccatatgctgatccgaaacctatggcacaatca
gccattccaagcgatatttttgaaaagtttataccgtttggttattctaaggaacaagtc
gttgctgcattcagagaggtttcagatggaactggggacaatgatccatcaactctctgg
ctctcagtaatgtgccatcttcgtcaagcagaggtttatagttctttttcggactctcaa
aatagaagaaaactttcagcaggaccttctagagcacaaactcgtcaagttgatcttgag
ggatctcttactaagaagttccgctcttgcaatgatggatccaccttaaatcgatgttca
tccagttcaagccatgccgtgaaagcctgctcatcttctttggcatcagacagaaccaaa
gggataacaaatttcccacgcctccctcctcttaaatttggagaaacatttgaggaagca
tatgatgtgatgttgatactggatgatcgagaaaagtttgccactaagggatcacggtcc
aggaatataattgataacatatgctctgaattcaatatcaagattgaggttagacggtta
ccagttggggattgtatctggattgctcggcataagtgccttgaggatgaatatgttctg
gattttattgccgagaggaagaatgttgatgatatgcgctcatcaattagagataatcgc
tacagggaccaaaaacttagacttcagagatcggggttaaagaagctgatatacattctt
gaaggagatccgaaccattctgatgcggcagaaagcattaaaacggcttgtttcacgaca
gagattctggagggatttgatgtgctgaggacaaacgggctgggtgagacgctaagaaaa
tacggttacctcactaaatcaatatatcaatactacaagttacgggtgaatgataacgac
cagggcaaagttgcggcctcttgtccttcttttgatagttttgtcaaaaggtgtcaagac
cttgacaaaatgacaatcagcgatgtatttgccattcagcttatgcagatcccgcaggta
acggaggaaattgccatggctgttcttgatatgtacccaacgcttttatctcttgcttct
gcatattctcatctagaaggggatgtctgtgcgcaagaagagatgttgagaaatcaaagc
aacaatgtaatatgtgcgtcagctagtaagattatatgcaagttagtctggggtgaatga
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